RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 IRX2Q9BZI1 471 aaPredicted RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 MKRN2Q9H000 416 aaKnown RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 VPS45Q9NRW7 570 aa20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 BCCIPQ9P287 314 aaKnown RBP eCLIP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 CDV3Q9UKY7 258 aaKnown RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 ASCC3Q8N3C0 2202 aaKnown RBP20.61■□□□□ 0.89
PDZRN3-202ENST00000308537 IGHV1OR15-9A0A0B4J2B8 117 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 FOXD2O60548 495 aaPredicted RBP20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 CDH5P33151 784 aaPredicted RBP20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 YWHAZP63104 245 aaKnown RBP20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 FOXK2Q01167 660 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 CREB5Q02930 508 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 ZNF234Q14588 700 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 DRAP1Q14919 205 aaPredicted RBP20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 PTPRNQ16849 979 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 FUT11Q495W5 492 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 OLFML1Q6UWY5 402 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 GBP4Q96PP9 640 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 ADAM33Q9BZ11 813 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 NUCKS1Q9H1E3 243 aaKnown RBP20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 GANQ9H2C0 597 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 HSD3B7Q9H2F3 369 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 POPDC2Q9HBU9 364 aa20.6■□□□□ 0.89
PDZRN3-202ENST00000308537 PATE3B3GLJ2 98 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 NPC1O15118 1278 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 CAVIN2O95810 425 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 TRUB2O95900 331 aaKnown RBP20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 ERBB2P04626 1255 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 UCHL3P15374 230 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 SDHBP21912 280 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 PRKCHP24723 683 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 COPAP53621 1224 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 PTK2Q05397 1052 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 KRT31Q15323 416 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 OTUD1Q5VV17 481 aaPredicted RBP20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 PEAR1Q5VY43 1037 aaPredicted RBP20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 GOLGA1Q92805 767 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 PPP1R13BQ96KQ4 1090 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 PLCB1Q9NQ66 1216 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 TMEM74BQ9NUR3 256 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 ABCB8Q9NUT2 735 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 ASNSD1Q9NWL6 643 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 TAB2Q9NYJ8 693 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 TPRP12270 2363 aaKnown RBP20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 PCDH15Q96QU1 1955 aa20.59■□□□□ 0.89
PDZRN3-202ENST00000308537 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 DCDC2BA2VCK2 349 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 GLI1P08151 1106 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 CD70P32970 193 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 KLK7P49862 253 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 RPS24P62847 133 aaKnown RBP20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 ZC3H12AQ5D1E8 599 aaKnown RBP20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 MS4A13Q5J8X5 152 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 SPDYCQ5MJ68 293 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 FAM183BPQ6ZVS7 135 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 METTL3Q86U44 580 aaKnown RBP20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 TMEFF1Q8IYR6 380 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 PGBD3Q8N328 593 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 MYO19Q96H55 970 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 SPACA7Q96KW9 195 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 TMEM245Q9H330 911 aa20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 INTS6Q9UL03 887 aaKnown RBP20.58■□□□□ 0.89
PDZRN3-202ENST00000308537 LNP1A1A4G5 178 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 KCNU1A8MYU2 1149 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 EPHB6O15197 1021 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 TBL1XO60907 577 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 PABPC1P11940 636 aaKnown RBP20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 CYP11B1P15538 503 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 SLC11A2P49281 568 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 NCAPHQ15003 741 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 SDE2Q6IQ49 451 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 CHST9Q7L1S5 443 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 APTXQ7Z2E3 356 aaKnown RBP20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 SLC41A1Q8IVJ1 513 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 DEFB106AQ8N104 65 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 WFIKKN2Q8TEU8 576 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 PRMT1Q99873 361 aaKnown RBP20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 LSM14BQ9BX40 385 aaKnown RBP20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 FANCLQ9NW38 375 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 USP36Q9P275 1121 aaKnown RBP20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 GGA2Q9UJY4 613 aa20.57■□□□□ 0.88
PDZRN3-202ENST00000308537 F8VZ95 297 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 TIMM44O43615 452 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 HLA-EP13747 358 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 DHPSP49366 369 aaPredicted RBP20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 AASDHQ4L235 1098 aaPredicted RBP20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 LPCAT2Q7L5N7 544 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 SLC26A9Q7LBE3 791 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 ZNF397Q8NF99 534 aaPredicted RBP20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 FIBINQ8TAL6 211 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 CYB5D2Q8WUJ1 264 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 UCMAQ8WVF2 138 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 TRIM62Q9BVG3 475 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 CIPCQ9C0C6 399 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 CYP8B1Q9UNU6 501 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 SIK3Q9Y2K2 1263 aa20.56■□□□□ 0.88
PDZRN3-202ENST00000308537 KNL1Q8NG31 2342 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 ADAMTS9Q9P2N4 1935 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 CAPN9O14815 690 aa20.55■□□□□ 0.88
PDZRN3-202ENST00000308537 HSF2BPO75031 334 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms