RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 PTPRAP18433 802 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 TSPAN8P19075 237 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 SFT2D3Q587I9 215 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 PPM1LQ5SGD2 360 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 PAOXQ6QHF9 649 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 CYP2R1Q6VVX0 501 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 CTU1Q7Z7A3 348 aaKnown RBP13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 CELF6Q96J87 481 aaKnown RBP13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 MPP4Q96JB8 637 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 GORASP1Q9BQQ3 440 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 SIN3BO75182 1162 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 HOXC6P09630 235 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 SRGAP2BP0DMP2 458 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 CPA3P15088 417 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 FLOT2Q14254 428 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 MAP7D1Q3KQU3 841 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 ARHGAP22Q7Z5H3 698 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 CDKL3Q8IVW4 592 aaPredicted RBP13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 DPP3Q9NY33 737 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 V9GYQ6 96 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 BRCA2P51587 3418 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 SCN9AQ15858 1988 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 MAST2Q6P0Q8 1798 aa13.69□□□□□ -0.22
TNFRSF21-201ENST00000296861 PPEF2O14830 753 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 MSCO60682 206 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 ARL2P36404 184 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 CASP2P42575 452 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 SULT1E1P49888 294 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 ZNF143P52747 638 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 OCRLQ01968 901 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 DYNC1I2Q13409 638 aaKnown RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 KCTD2Q14681 263 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 IER5Q5VY09 327 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 FAM83AQ86UY5 434 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 CAND1Q86VP6 1230 aaKnown RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 PCDH20Q8N6Y1 951 aaKnown RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 DIS3LQ8TF46 1054 aaKnown RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 PPCSQ9HAB8 311 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 CACNG4Q9UBN1 327 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 LNPEPQ9UIQ6 1025 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 MX2P20592 715 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 FKBP1AP62942 108 aaKnown RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 C11orf91Q3C1V1 193 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 BOLA3Q53S33 107 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 CATSPER4Q7RTX7 472 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 LRRC43Q8N309 656 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 EZH1Q92800 747 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 AGAP2Q99490 1192 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 TRPV6Q9H1D0 765 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 POPDC2Q9HBU9 364 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 TIMM13Q9Y5L4 95 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 RFPL1O75677 317 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 PYGLP06737 847 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 PMLP29590 882 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 GARSP41250 739 aaKnown RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 SURF1Q15526 300 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 TREML2Q5T2D2 321 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 DRICH1Q6PGQ1 229 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 DHDDSQ86SQ9 333 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 TRIML2Q8N7C3 387 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 EPAS1Q99814 870 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 KLHL4Q9C0H6 718 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 NRDE2Q9H7Z3 1164 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 GOLGA2P5Q9HBQ8 144 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 LRRC4Q9HBW1 653 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 IARS2Q9NSE4 1012 aaKnown RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 SYBUQ9NX95 663 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 RGS17Q9UGC6 210 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 SSX2IPQ9Y2D8 614 aa13.68□□□□□ -0.22
TNFRSF21-201ENST00000296861 RNF103O00237 685 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ETV4P43268 484 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 NAGLUP54802 743 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ITKQ08881 620 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 MXD4Q14582 209 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 HABP4Q5JVS0 413 aaKnown RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 MOB2Q70IA6 237 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ZNF781Q8N8C0 355 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 MIPOL1Q8TD10 442 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ZNF398Q8TD17 642 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 MRPL45Q9BRJ2 306 aaKnown RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 SNX25Q9H3E2 840 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 DPEP3Q9H4B8 488 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ELP3Q9H9T3 547 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 TSR3Q9UJK0 312 aaKnown RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 ARIH2O95376 493 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 INSRRP14616 1297 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 MAPK10P53779 464 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 USP10Q14694 798 aaKnown RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 CCDC14Q49A88 953 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 CES4AQ5XG92 561 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 OR52E8Q6IFG1 317 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 FRMD7Q6ZUT3 714 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 IFNEQ86WN2 208 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 CCDC185Q8N715 623 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 TFB1MQ8WVM0 346 aaKnown RBP13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 NDNQ99608 321 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 CAAP1Q9H8G2 361 aa13.67□□□□□ -0.22
TNFRSF21-201ENST00000296861 SNTG2Q9NY99 539 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms