RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 ANLNQ9NQW6 1124 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 RASAL2Q9UJF2 1139 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 TLR6Q9Y2C9 796 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 ZNF510Q9Y2H8 683 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 SH3BP1Q9Y3L3 701 aa9.55□□□□□ -0.88
HMGN1-201ENST00000288344 PRRT4C9JH25 899 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 PES1O00541 588 aaKnown RBP9.54□□□□□ -0.88
HMGN1-201ENST00000288344 IRAK2O43187 625 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 AP5Z1O43299 807 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 ADAM23O75077 832 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 KAT7O95251 611 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 TRUB2O95900 331 aaKnown RBP9.54□□□□□ -0.88
HMGN1-201ENST00000288344 IRF1P10914 325 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 NCAM1P13591 858 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 TYRP14679 529 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 TFE3P19532 575 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-201ENST00000288344 CHKAP35790 457 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 TNFRSF4P43489 277 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 SGSHP51688 502 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 AMPD2Q01433 879 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 DMWDQ09019 674 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 GRSF1Q12849 480 aaKnown RBP eCLIP9.54□□□□□ -0.88
HMGN1-201ENST00000288344 ARID5BQ14865 1188 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 C5orf22Q49AR2 442 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 EFHC1Q5JVL4 640 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 PIK3R6Q5UE93 754 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 HGSNATQ68CP4 663 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 TOGARAM2Q6ZUX3 1019 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 SYT13Q7L8C5 426 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 PHF13Q86YI8 300 aaPredicted RBP9.54□□□□□ -0.88
HMGN1-201ENST00000288344 DENND1CQ8IV53 801 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 ZNF683Q8IZ20 524 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 DEFB106AQ8N104 65 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 CPA5Q8WXQ8 436 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 UCN2Q96RP3 112 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 PNKPQ96T60 521 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 ST7Q9NRC1 585 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 MAP10Q9P2G4 905 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 WDR35Q9P2L0 1181 aa9.54□□□□□ -0.88
HMGN1-201ENST00000288344 XPO7Q9UIA9 1087 aaKnown RBP9.54□□□□□ -0.88
HMGN1-201ENST00000288344 CCDC163A0A0D9SF12 145 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 GOLGA6L7A0A1B0GV03 622 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 HSF2BPO75031 334 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 ADH1CP00326 375 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 HMBSP08397 361 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 HOXD9P28356 352 aaPredicted RBP9.53□□□□□ -0.88
HMGN1-201ENST00000288344 NOS2P35228 1153 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 GRIA2P42262 883 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 MATKP42679 507 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 CXCL12P48061 93 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 CXCR3P49682 368 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 MRPS21P82921 87 aaKnown RBP9.53□□□□□ -0.88
HMGN1-201ENST00000288344 CENPCQ03188 943 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 LRRC32Q14392 662 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 PTPRNQ16849 979 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 MSS51Q4VC12 460 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 C2CD6Q53TS8 623 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 MPP7Q5T2T1 576 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 TAF3Q5VWG9 929 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 TSSK4Q6SA08 328 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.53□□□□□ -0.88
HMGN1-201ENST00000288344 NAT16Q8N8M0 369 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 TERB1Q8NA31 727 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 IL17RCQ8NAC3 791 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 SUMF1Q8NBK3 374 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 ANKRD20A12PQ8NF67 263 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 NEK11Q8NG66 645 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 ADAM32Q8TC27 787 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 RNF139Q8WU17 664 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 CENPIQ92674 756 aaPredicted RBP9.53□□□□□ -0.88
HMGN1-201ENST00000288344 C18orf8Q96DM3 657 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 AGPAT1Q99943 283 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 IRF2BPLQ9H1B7 796 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 SPATA6Q9NWH7 488 aaPredicted RBP9.53□□□□□ -0.88
HMGN1-201ENST00000288344 STRIP2Q9ULQ0 834 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 NENFQ9UMX5 172 aa9.53□□□□□ -0.88
HMGN1-201ENST00000288344 SDK1Q7Z5N4 2213 aa9.52□□□□□ -0.88
HMGN1-201ENST00000288344 A0A1W2PQJ5 194 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 ACSL4O60488 711 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 DAB1O75553 588 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 DXOO77932 396 aaKnown RBP9.52□□□□□ -0.89
HMGN1-201ENST00000288344 TPM2P07951 284 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 HNRNPH3P31942 346 aaKnown RBP9.52□□□□□ -0.89
HMGN1-201ENST00000288344 FLT3P36888 993 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 MMP16P51512 607 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 CCR3P51677 355 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 TBX4P57082 545 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 GOLGA8FQ08AF8 430 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 GOLGA8DPQ0D2H9 430 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 PPP2R5DQ14738 602 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 GEN1Q17RS7 908 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 CLEC16AQ2KHT3 1053 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 DCAF6Q58WW2 860 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 ZC3H12AQ5D1E8 599 aaKnown RBP9.52□□□□□ -0.89
HMGN1-201ENST00000288344 NAA35Q5VZE5 725 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 TRIM72Q6ZMU5 477 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 TPGS1Q6ZTW0 290 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 MON1BQ7L1V2 547 aa9.52□□□□□ -0.89
HMGN1-201ENST00000288344 RSRC2Q7L4I2 434 aaKnown RBP9.52□□□□□ -0.89
HMGN1-201ENST00000288344 ZNF571Q7Z3V5 609 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms