RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 GABRG3Q99928 467 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 TUBGCP2Q9BSJ2 902 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 NDST4Q9H3R1 872 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 PLCB1Q9NQ66 1216 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 XPO7Q9UIA9 1087 aaKnown RBP18.47■□□□□ 0.55
PNKP-230ENST00000638016 SLC27A6Q9Y2P4 619 aa18.47■□□□□ 0.55
PNKP-230ENST00000638016 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 KCNJ18B7U540 433 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 FBXO21O94952 628 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 CYBBP04839 570 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 NDUFV2P19404 249 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 IL12RB1P42701 662 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 TBX4P57082 545 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 PDCLQ13371 301 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 KCNJ12Q14500 433 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 FAM133BQ5BKY9 247 aaKnown RBP18.46■□□□□ 0.55
PNKP-230ENST00000638016 NUDT18Q6ZVK8 323 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 TRMT11Q7Z4G4 463 aaKnown RBP18.46■□□□□ 0.55
PNKP-230ENST00000638016 SLC47A2Q86VL8 602 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 TMEFF1Q8IYR6 380 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 KCNV2Q8TDN2 545 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 PRICKLE1Q96MT3 831 aaPredicted RBP18.46■□□□□ 0.55
PNKP-230ENST00000638016 CPXM1Q96SM3 734 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 TAB2Q9NYJ8 693 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 STOML2Q9UJZ1 356 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 FHOD1Q9Y613 1164 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 STON1Q9Y6Q2 735 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 CEP192Q8TEP8 1941 aa18.46■□□□□ 0.55
PNKP-230ENST00000638016 CNOT1A5YKK6 2376 aaKnown RBP18.46■□□□□ 0.55
PNKP-230ENST00000638016 ATXN2Q99700 1313 aaKnown RBP18.46■□□□□ 0.55
PNKP-230ENST00000638016 LAMA1P25391 3075 aa18.46■□□□□ 0.54
PNKP-230ENST00000638016 MUC22E2RYF6 1773 aaPredicted RBP18.45■□□□□ 0.54
PNKP-230ENST00000638016 BCLAF3A2AJT9 711 aaKnown RBP18.45■□□□□ 0.54
PNKP-230ENST00000638016 PRR5-ARHGAP8B1AHC4 643 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 PATE3B3GLJ2 98 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 FOXN3O00409 490 aaPredicted RBP18.45■□□□□ 0.54
PNKP-230ENST00000638016 MED7O43513 233 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 RHOBTB1O94844 696 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 ZNF806P0C7X5 589 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 HLA-FP30511 346 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 CLCN1P35523 988 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 PTGER3P43115 390 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 DHPSP49366 369 aaPredicted RBP18.45■□□□□ 0.54
PNKP-230ENST00000638016 ARHGAP8P85298 464 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 AASDHQ4L235 1098 aaPredicted RBP18.45■□□□□ 0.54
PNKP-230ENST00000638016 ADGRF1Q5T601 910 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 ANKS1BQ7Z6G8 1248 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 FAM114A1Q8IWE2 563 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 C1orf131Q8NDD1 294 aaKnown RBP18.45■□□□□ 0.54
PNKP-230ENST00000638016 GOLGA1Q92805 767 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 CIPCQ9C0C6 399 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 DACH1Q9UI36 760 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 NFE2L3Q9Y4A8 694 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 CKAP5Q14008 2032 aa18.45■□□□□ 0.54
PNKP-230ENST00000638016 PES1O00541 588 aaKnown RBP18.44■□□□□ 0.54
PNKP-230ENST00000638016 MOCS2O96007 188 aaPredicted RBP18.44■□□□□ 0.54
PNKP-230ENST00000638016 PRKCHP24723 683 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 ACADSBP45954 432 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 ZNF234Q14588 700 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 MPPE1Q53F39 396 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 C11orf57Q6ZUT1 292 aaPredicted RBP18.44■□□□□ 0.54
PNKP-230ENST00000638016 ERMP1Q7Z2K6 904 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 TMEM110Q86TL2 294 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 CACUL1Q86Y37 369 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 C12orf50Q8NA57 414 aaPredicted RBP18.44■□□□□ 0.54
PNKP-230ENST00000638016 NETO1Q8TDF5 533 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 STK32AQ8WU08 396 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 CYB5D2Q8WUJ1 264 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 LSM14BQ9BX40 385 aaKnown RBP18.44■□□□□ 0.54
PNKP-230ENST00000638016 NUCKS1Q9H1E3 243 aaKnown RBP18.44■□□□□ 0.54
PNKP-230ENST00000638016 THAP10Q9P2Z0 257 aaPredicted RBP18.44■□□□□ 0.54
PNKP-230ENST00000638016 PCDHGA5Q9Y5G8 931 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 PI4KAP42356 2102 aa18.44■□□□□ 0.54
PNKP-230ENST00000638016 ACSL4O60488 711 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 TBL1XO60907 577 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 GRAP2O75791 330 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 CAVIN2O95810 425 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 ERBB2P04626 1255 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 HLA-EP13747 358 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 KLK7P49862 253 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 RAPGEF1Q13905 1077 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 MEA1Q16626 185 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 FUT11Q495W5 492 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 TCP11X2Q5H9J9 407 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 PIK3R6Q5UE93 754 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 SDE2Q6IQ49 451 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 RBM43Q6ZSC3 357 aaKnown RBP18.43■□□□□ 0.54
PNKP-230ENST00000638016 ZNF366Q8N895 744 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 TMA16Q96EY4 203 aaKnown RBP18.43■□□□□ 0.54
PNKP-230ENST00000638016 SLC39A13Q96H72 371 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 SPACA7Q96KW9 195 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 MRGPRX1Q96LB2 322 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 GBP4Q96PP9 640 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 ABCB8Q9NUT2 735 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 ELOVL2Q9NXB9 296 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 STIM2Q9P246 746 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 CYP8B1Q9UNU6 501 aa18.43■□□□□ 0.54
PNKP-230ENST00000638016 IGHV1OR15-9A0A0B4J2B8 117 aa18.42■□□□□ 0.54
PNKP-230ENST00000638016 SLC30A4O14863 429 aa18.42■□□□□ 0.54
PNKP-230ENST00000638016 LATS1O95835 1130 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms