RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 NAB1Q13506 487 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 LDLRAD1Q5T700 205 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 ALKAL1Q6UXT8 129 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 TIFABQ6ZNK6 161 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 ZNF534Q76KX8 674 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 MARK2Q7KZI7 788 aaKnown RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 CCNJLQ8IV13 435 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 C7orf31Q8N865 590 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 ENDOVQ8N8Q3 282 aaKnown RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 GPATCH11Q8N954 259 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 DEPDC1BQ8WUY9 529 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 TFB1MQ8WVM0 346 aaKnown RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 E2F7Q96AV8 911 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 C18orf25Q96B23 403 aaPredicted RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 SLC10A4Q96EP9 437 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 PTCD3Q96EY7 689 aaKnown RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 TNIP3Q96KP6 325 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 SPATA13Q96N96 652 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 NUDCD1Q96RS6 583 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 BTBD10Q9BSF8 475 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 EIF2AQ9BY44 585 aaKnown RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 FAM49AQ9H0Q0 323 aaPredicted RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 ABHD16BQ9H3Z7 469 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 DPEP3Q9H4B8 488 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 KCNK13Q9HB14 408 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 PLAC1Q9HBJ0 212 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 EIF2B3Q9NR50 452 aaKnown RBP8.33□□□□□ -1.08
GPC3-204ENST00000631057 SMYD2Q9NRG4 433 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 MTMR10Q9NXD2 777 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 GDAP2Q9NXN4 497 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 KCNK4Q9NYG8 393 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 SIRPGQ9P1W8 387 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 MORF4L1Q9UBU8 362 aa8.33□□□□□ -1.08
GPC3-204ENST00000631057 SF3B1O75533 1304 aaKnown RBP eCLIP8.33□□□□□ -1.08
GPC3-204ENST00000631057 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 KPNA7A9QM74 516 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 H3BRJ5 948 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 PDHXO00330 501 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 PIRO00625 290 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 FCHO1O14526 889 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 XPO1O14980 1071 aaKnown RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 OPHN1O60890 802 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 GPR32O75388 356 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 DAB1O75553 588 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 DGKIO75912 1065 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 LUC7L3O95232 432 aaKnown RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 MAP3K6O95382 1288 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 RPSAP08865 295 aaKnown RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 CSH1P0DML2 217 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 CSH2P0DML3 217 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 MYL2P10916 166 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 DARSP14868 501 aaKnown RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 KCNE1P15382 129 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 TFE3P19532 575 aaPredicted RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 SERPINB3P29508 390 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 MATKP42679 507 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 TMPRSS15P98073 1019 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 SLC10A2Q12908 348 aaPredicted RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 NBPF20Q3BBV1 942 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 SV2CQ496J9 727 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 GLRA4Q5JXX5 417 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 ANKRD20A2Q5SQ80 823 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 STXBP5Q5T5C0 1151 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 ANKRD20A1Q5TYW2 823 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 NCBP2-AS2Q69YL0 99 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 IQSEC1Q6DN90 963 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 DPP9Q86TI2 863 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 NUDCD3Q8IVD9 361 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 ARHGAP24Q8N264 748 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 CCDC185Q8N715 623 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.32□□□□□ -1.08
GPC3-204ENST00000631057 MAB21L3Q8N8X9 362 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 ARMC2Q8NEN0 867 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 APPL2Q8NEU8 664 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 ACMSDQ8TDX5 336 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 CLEC4CQ8WTT0 213 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 KBTBD7Q8WVZ9 684 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 HTR3CQ8WXA8 447 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 CDKL2Q92772 493 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 OXNAD1Q96HP4 312 aaPredicted RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 OLFM3Q96PB7 478 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 NAT9Q9BTE0 207 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 WWP1Q9H0M0 922 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 CXCL16Q9H2A7 254 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 MMADHCQ9H3L0 296 aaPredicted RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 NXF3Q9H4D5 531 aaKnown RBP8.32□□□□□ -1.08
GPC3-204ENST00000631057 BATF3Q9NR55 127 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 SETD4Q9NVD3 440 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 ARL8BQ9NVJ2 186 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 DTLQ9NZJ0 730 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 FZD10Q9ULW2 581 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 GINS2Q9Y248 185 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 USP3Q9Y6I4 520 aa8.32□□□□□ -1.08
GPC3-204ENST00000631057 SMIM35A0A1B0GVV1 85 aa8.31□□□□□ -1.08
GPC3-204ENST00000631057 SDR42E2A6NKP2 422 aa8.31□□□□□ -1.08
GPC3-204ENST00000631057 GYG2O15488 501 aa8.31□□□□□ -1.08
GPC3-204ENST00000631057 UGT1A9O60656 530 aa8.31□□□□□ -1.08
GPC3-204ENST00000631057 HUS1O60921 280 aa8.31□□□□□ -1.08
GPC3-204ENST00000631057 ALDH1A2O94788 518 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms