RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 COX16Q9P0S2 106 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 SLC12A6Q9UHW9 1150 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 INTUQ9ULD6 942 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 PCDHA13Q9Y5I0 950 aa17.05■□□□□ 0.32
SPTSSB-204ENST00000617024 HELZP42694 1942 aaKnown RBP17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 TMEM191CA6NGB0 347 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 IRAK2O43187 625 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 NRDCO43847 1150 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 SLC2A3P11169 496 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 CORO1AP31146 461 aaKnown RBP17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 PTPN9P43378 593 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 IFNAR2P48551 515 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 ZNF143P52747 638 aaPredicted RBP17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 ATP11AP98196 1134 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 DEUP1Q05D60 604 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 EIF4EBP2Q13542 120 aaPredicted RBP17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 PDGFRLQ15198 375 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 NUGGCQ68CJ6 796 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 DENND1CQ8IV53 801 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 CCDC112Q8NEF3 446 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 OTUB2Q96DC9 234 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 ARHGEF26Q96DR7 871 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 SLC39A13Q96H72 371 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 NUP85Q9BW27 656 aa17.04■□□□□ 0.32
SPTSSB-204ENST00000617024 GREM1O60565 184 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 ENDOD1O94919 500 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 IGLV3-27P01718 113 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 KLKB1P03952 638 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 SRFP11831 508 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 TFE3P19532 575 aaPredicted RBP17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 CCR1P32246 355 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 NBL1P41271 181 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 KRT83P78385 493 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 C15orf59Q2T9L4 293 aaPredicted RBP17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 ZC3H12AQ5D1E8 599 aaKnown RBP17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 Q6ZNB5 142 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 UBALD2Q8IYN6 164 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 ADGRG2Q8IZP9 1017 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 ATP6V0D2Q8N8Y2 350 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 CSGALNACT1Q8TDX6 532 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 AZIN2Q96A70 460 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 ZFYVE19Q96K21 471 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 FCRL2Q96LA5 508 aaPredicted RBP17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 FAM83CQ9BQN1 747 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 CNPY3Q9BT09 278 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 WDCPQ9H6R7 721 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 CTTNBP2NLQ9P2B4 639 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 UVRAGQ9P2Y5 699 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 AGO1Q9UL18 857 aaKnown RBP17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 DUSP12Q9UNI6 340 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 PAXBP1Q9Y5B6 917 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 WNT6Q9Y6F9 365 aa17.03■□□□□ 0.32
SPTSSB-204ENST00000617024 SCAMP3O14828 347 aaKnown RBP17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 NARSO43776 548 aaKnown RBP17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 LATS1O95835 1130 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 APOEP02649 317 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 RDXP35241 583 aaKnown RBP17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 SLC11A2P49281 568 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 CXCR3P49682 368 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 NUBP1P53384 320 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 PFKPQ01813 784 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 NR1H3Q13133 447 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 PPP2R5DQ14738 602 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 CDO1Q16878 200 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 EML3Q32P44 896 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 STRADAQ7RTN6 431 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 BBS7Q8IWZ6 715 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 FNIP1Q8TF40 1166 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 FAM172AQ8WUF8 416 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 CENPIQ92674 756 aaPredicted RBP17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 ATP2A3Q93084 1043 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 TRPV5Q9NQA5 729 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 SLC2A4RGQ9NR83 387 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 PIGVQ9NUD9 493 aa17.02■□□□□ 0.32
SPTSSB-204ENST00000617024 KCNU1A8MYU2 1149 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 MYO1FO00160 1098 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 ARHGAP6O43182 974 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 ACSL4O60488 711 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 PSMA2P25787 234 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 CHKAP35790 457 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 MTA1Q13330 715 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 RUNX3Q13761 415 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 BRMS1LQ5PSV4 323 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 SH3PXD2AQ5TCZ1 1133 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 OTUD1Q5VV17 481 aaPredicted RBP17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 TRIM68Q6AZZ1 485 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 BNIPLQ7Z465 357 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 SLC35G2Q8TBE7 412 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 ZNF564Q8TBZ8 553 aaPredicted RBP17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 BTN2A3PQ96KV6 586 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 DDX50Q9BQ39 737 aaKnown RBP17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 ADAM33Q9BZ11 813 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 EBF3Q9H4W6 596 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 CALCOCO1Q9P1Z2 691 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 IP6K2Q9UHH9 426 aa17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 EP300Q09472 2414 aaPredicted RBP17.01■□□□□ 0.31
SPTSSB-204ENST00000617024 CCP110O43303 1012 aa17■□□□□ 0.31
SPTSSB-204ENST00000617024 RNF8O76064 485 aa17■□□□□ 0.31
SPTSSB-204ENST00000617024 NFATC1O95644 943 aa17■□□□□ 0.31
SPTSSB-204ENST00000617024 MOCS2O96007 188 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms