RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 TRIM62Q9BVG3 475 aa18.52■□□□□ 0.56
SEMA6C-209ENST00000613223 FRMD8Q9BZ67 464 aaPredicted RBP18.52■□□□□ 0.56
SEMA6C-209ENST00000613223 KLC4Q9NSK0 619 aa18.52■□□□□ 0.56
SEMA6C-209ENST00000613223 DDIT4Q9NX09 232 aa18.52■□□□□ 0.56
SEMA6C-209ENST00000613223 CLUHO75153 1309 aa18.52■□□□□ 0.56
SEMA6C-209ENST00000613223 DGKIO75912 1065 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 GPX6P59796 221 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 CBLBQ13191 982 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 DPYSQ14117 519 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 BBS9Q3SYG4 887 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 SPATA2LQ8IUW3 424 aaPredicted RBP18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 FAM126BQ8IXS8 530 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 ATXN2LQ8WWM7 1075 aaKnown RBP18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 WDR83Q9BRX9 315 aaKnown RBP18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 SLC40A1Q9NP59 571 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 FBXW11Q9UKB1 542 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 MFHAS1Q9Y4C4 1052 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 EEF2KO00418 725 aaKnown RBP18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 DNM1LO00429 736 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 CREB3O43889 395 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 MFSD11O43934 449 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 OR1G1P47890 313 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 ARL13BQ3SXY8 428 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 HEATR6Q6AI08 1181 aaKnown RBP18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 RFX8Q6ZV50 586 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 FBXO36Q8NEA4 188 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 CCDC110Q8TBZ0 833 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 TFB1MQ8WVM0 346 aaKnown RBP18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 CCT6BQ92526 530 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 FAM193BQ96PV7 902 aaPredicted RBP18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 CCDC134Q9H6E4 229 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 ELAC1Q9H777 363 aaKnown RBP18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 BRCA2P51587 3418 aa18.51■□□□□ 0.55
SEMA6C-209ENST00000613223 NBNO60934 754 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 OAZ2O95190 189 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 GCAP28676 217 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 SEMA3BQ13214 749 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 RASA2Q15283 850 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 BSPRYQ5W0U4 402 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 CAPN12Q6ZSI9 719 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 BEND5Q7L4P6 421 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 CYP4X1Q8N118 509 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 LRRN4Q8WUT4 740 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 EDEM1Q92611 657 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 COLEC11Q9BWP8 271 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 SAGE1Q9NXZ1 904 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 FETUBQ9UGM5 382 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 TBK1Q9UHD2 729 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 SLC24A2Q9UI40 661 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 ACTL7BQ9Y614 415 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 NR1H3Q13133 447 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 PAFAH1B3Q15102 231 aaKnown RBP18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 PLEKHG4Q58EX7 1191 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 VPS52Q8N1B4 723 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 CCDC197Q8NCU1 140 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 SH3TC2Q8TF17 1288 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 HTR3CQ8WXA8 447 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 ZCWPW1Q9H0M4 648 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 INTS9Q9NV88 658 aaKnown RBP18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 DNAJB4Q9UDY4 337 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 PRG3Q9Y2Y8 225 aaPredicted RBP18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 TRIM17Q9Y577 477 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 CEP350Q5VT06 3117 aa18.5■□□□□ 0.55
SEMA6C-209ENST00000613223 SCTRP47872 440 aa18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 HCAR3P49019 387 aa18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 CXCR3P49682 368 aa18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 ZNF135P52742 658 aaPredicted RBP18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 TMED2Q15363 201 aa18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 FAM43BQ6ZT52 329 aaPredicted RBP18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 PALM2Q8IXS6 379 aa18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 CCDC33Q8N5R6 958 aa18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 MAML1Q92585 1016 aa18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 ETNK1Q9HBU6 452 aa18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 ANLNQ9NQW6 1124 aa18.49■□□□□ 0.55
SEMA6C-209ENST00000613223 I6L893 689 aaPredicted RBP18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 ENPP3O14638 875 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 SYN3O14994 580 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 DCLK1O15075 740 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 CHUKO15111 745 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 VAV1P15498 845 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 ATP2A2P16615 1042 aaKnown RBP18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 SSTR1P30872 391 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 ITIH4Q14624 930 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 GPNMBQ14956 572 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 PDK1Q15118 436 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 PRKD1Q15139 912 aaPredicted RBP18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 SPRED3Q2MJR0 410 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 SLC39A12Q504Y0 691 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 FAXCQ5TGI0 409 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 ARHGEF18Q6ZSZ5 1173 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 C3orf62Q6ZUJ4 267 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 PIGWQ7Z7B1 504 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 TAC4Q86UU9 113 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 DCP1BQ8IZD4 617 aaKnown RBP18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 ABI1Q8IZP0 508 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 ANKS4BQ8N8V4 417 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 MCUQ8NE86 351 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 DBF4BQ8NFT6 615 aa18.48■□□□□ 0.55
SEMA6C-209ENST00000613223 UNC93B1Q9H1C4 597 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms