RNA–Protein interactions for RNA: ENST00000602970.1

UBE2E3-214, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-214ENST00000602970 ADRA1BP35368 520 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 MLLT3P42568 568 aaPredicted RBP12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 CLCN4P51793 760 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 EFEMP1Q12805 493 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 NNTQ13423 1086 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 CAMK1Q14012 370 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 CYP1B1Q16678 543 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 BRMS1LQ5PSV4 323 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 BBS12Q6ZW61 710 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 CDK5RAP1Q96SZ6 601 aaKnown RBP12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 RHOXF2Q9BQY4 288 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 WDCPQ9H6R7 721 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 CCSER2Q9H7U1 834 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 TMPRSS4Q9NRS4 437 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 MTMR10Q9NXD2 777 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 TRPM5Q9NZQ8 1165 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 RCOR3Q9P2K3 495 aaPredicted RBP12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 RASAL2Q9UJF2 1139 aa12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 R3HDM2Q9Y2K5 976 aaKnown RBP12.49□□□□□ -0.41
UBE2E3-214ENST00000602970 H3BRJ5 948 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 CST8O60676 142 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 C1RP00736 705 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 CCR1P32246 355 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 ARL4AP40617 200 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 FNTAP49354 379 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 TBX4P57082 545 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 DYNLT1P63172 113 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 ADCY2Q08462 1091 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 EIF4EBP2Q13542 120 aaPredicted RBP12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 TFDP2Q14188 446 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 PPP2R5DQ14738 602 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 TRIP4Q15650 581 aaPredicted RBP12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 GLE1Q53GS7 698 aaKnown RBP12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 SNX30Q5VWJ9 437 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 DNAJB7Q7Z6W7 309 aaPredicted RBP12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 TADA2BQ86TJ2 420 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 PYROXD2Q8N2H3 581 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 ELMOD1Q8N336 334 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 ZNF276Q8N554 614 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 GPR161Q8N6U8 529 aaKnown RBP12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 C1orf54Q8WWF1 131 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 ATG4AQ8WYN0 398 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 TSC1Q92574 1164 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 MAGOHBQ96A72 148 aaKnown RBP12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 FAF2Q96CS3 445 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 RUNDC3BQ96NL0 473 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 RNF157Q96PX1 679 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 MAK16Q9BXY0 300 aaKnown RBP12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 DCLK3Q9C098 648 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 TKTL2Q9H0I9 626 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 LMAN2LQ9H0V9 348 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 CERS4Q9HA82 394 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 ZNF334Q9HCZ1 680 aaPredicted RBP12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 HOMER3Q9NSC5 361 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 ARHGEF38Q9NXL2 777 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 MARCH2Q9P0N8 246 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 TLR6Q9Y2C9 796 aa12.48□□□□□ -0.41
UBE2E3-214ENST00000602970 ZNF840PA6NDX5 716 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 I6L893 689 aaPredicted RBP12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 APOL1O14791 398 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 RAD51CO43502 376 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 CLASP2O75122 1294 aaKnown RBP12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 APOEP02649 317 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 SLC2A3P11169 496 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 BMP8BP34820 402 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 COILP38432 576 aaPredicted RBP12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 PPP3CCP48454 512 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 TUBP50607 506 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 CCNG2Q16589 344 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 ANKRD20A8PQ5CZ79 823 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 PPM1LQ5SGD2 360 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 HECTD3Q5T447 861 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 TTC27Q6P3X3 843 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 RTL10Q7L3V2 364 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 MIB1Q86YT6 1006 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 TDHQ8IZJ6 230 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 PCDH19Q8TAB3 1148 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 CCDC26Q8TAB7 109 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 GDPD5Q8WTR4 605 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 ARNTL2Q8WYA1 636 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 HAUS1Q96CS2 278 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 SLC39A13Q96H72 371 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 FCRL2Q96LA5 508 aaPredicted RBP12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 CSPG4P5Q96PW8 444 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 MAGEB5Q9BZ81 275 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 EPC1Q9H2F5 836 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 PLEKHA4Q9H4M7 779 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 LRRC19Q9H756 370 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 ANKZF1Q9H8Y5 726 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 SLC28A3Q9HAS3 691 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 ANLNQ9NQW6 1124 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 MAN1C1Q9NR34 630 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 CWC15Q9P013 229 aaKnown RBP12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 MYO7AQ13402 2215 aa12.47□□□□□ -0.41
UBE2E3-214ENST00000602970 SLC12A8A0AV02 714 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms