RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 DDX50Q9BQ39 737 aaKnown RBP16.51■□□□□ 0.23
PPFIA4-213ENST00000601609 TPSD1Q9BZJ3 242 aa16.51■□□□□ 0.23
PPFIA4-213ENST00000601609 TLR6Q9Y2C9 796 aa16.51■□□□□ 0.23
PPFIA4-213ENST00000601609 SIK3Q9Y2K2 1263 aa16.51■□□□□ 0.23
PPFIA4-213ENST00000601609 ZFHX2Q9C0A1 2572 aaPredicted RBP16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 A0A0A0MRY4 1105 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 GOLGA6L7A0A1B0GV03 622 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 TCRBV21S2A2A0A5A6 115 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 EPHB6O15197 1021 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 ZBTB24O43167 697 aaPredicted RBP16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 HRO43593 1189 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 ACSL4O60488 711 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 TRUB2O95900 331 aaKnown RBP16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 IGLV3-27P01718 113 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 GLI1P08151 1106 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 MMEP08473 750 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 HOXB2P14652 356 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 GBP1P32455 592 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 RING1Q06587 406 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 NAA35Q5VZE5 725 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 EGFLAMQ63HQ2 1017 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 RFWD3Q6PCD5 774 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 CCDC117Q8IWD4 279 aaPredicted RBP16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 DHX40Q8IX18 779 aaKnown RBP16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 EPS8L1Q8TE68 723 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 UCMAQ8WVF2 138 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 ERLEC1Q96DZ1 483 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 FCRL2Q96LA5 508 aaPredicted RBP16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 CIPCQ9C0C6 399 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 SEPT11Q9NVA2 429 aaKnown RBP16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 ASNSD1Q9NWL6 643 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 DDIT4Q9NX09 232 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 STIM2Q9P246 746 aa16.5■□□□□ 0.23
PPFIA4-213ENST00000601609 CCDC163A0A0D9SF12 145 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 PRRT4C9JH25 899 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 IRAK2O43187 625 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 TBL1XO60907 577 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 DAB1O75553 588 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 LSM8O95777 96 aaKnown RBP16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 NTSR1P30989 418 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 RNASE9P60153 205 aaKnown RBP16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 SLC6A3Q01959 620 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 NNTQ13423 1086 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 ZC3H12AQ5D1E8 599 aaKnown RBP16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 FAM102AQ5T9C2 384 aaPredicted RBP16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 LAIR1Q6GTX8 287 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 OLFML1Q6UWY5 402 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 TMEM92Q6UXU6 159 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 BEND5Q7L4P6 421 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 CHSY1Q86X52 802 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 ZDHHC17Q8IUH5 632 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 FAM217AQ8IXS0 508 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 DCLK2Q8N568 766 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 KCNV2Q8TDN2 545 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 SLC20A1Q8WUM9 679 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 HMGB4Q8WW32 186 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 GAB3Q8WWW8 586 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 HSD3B7Q9H2F3 369 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 SLC12A6Q9UHW9 1150 aa16.49■□□□□ 0.23
PPFIA4-213ENST00000601609 GOLGA8SH3BPF8 625 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 SERPINC1P01008 464 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 CISD3P0C7P0 127 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 HOXD9P28356 352 aaPredicted RBP16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 JAM2P57087 298 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 PITX1P78337 314 aaPredicted RBP16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 NME3Q13232 169 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 GEN1Q17RS7 908 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 USP39Q53GS9 565 aaKnown RBP16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 ZNF677Q86XU0 584 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 ATP6V0D2Q8N8Y2 350 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 HJURPQ8NCD3 748 aaPredicted RBP16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 MDGA1Q8NFP4 955 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 CPA5Q8WXQ8 436 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 C18orf8Q96DM3 657 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 P2RY11Q96G91 374 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 SLC2A13Q96QE2 648 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 ERGIC2Q96RQ1 377 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 SLC2A11Q9BYW1 496 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 CACNA2D2Q9NY47 1150 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 STOML2Q9UJZ1 356 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 CLEC4EQ9ULY5 219 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 STAP1Q9ULZ2 295 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 INVSQ9Y283 1065 aa16.48■□□□□ 0.23
PPFIA4-213ENST00000601609 ADAM23O75077 832 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 ABCB4P21439 1286 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 SLC6A4P31645 630 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 CDH5P33151 784 aaPredicted RBP16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 SULT1E1P49888 294 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 SGSHP51688 502 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 NOMO3P69849 1222 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 CDR2Q01850 454 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 STARD3Q14849 445 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 C2CD6Q53TS8 623 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 FAM133BQ5BKY9 247 aaKnown RBP16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 RAP1GAP2Q684P5 730 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 SLC26A9Q7LBE3 791 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 APTXQ7Z2E3 356 aaKnown RBP16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 MFN1Q8IWA4 741 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 KIAA2013Q8IYS2 634 aa16.47■□□□□ 0.23
PPFIA4-213ENST00000601609 CARNMT1Q8N4J0 409 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms