RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 EPB41P11171 864 aaKnown RBP10.9□□□□□ -0.66
VPS4B-207ENST00000591519 PRCPP42785 496 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 MXI1P50539 228 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 MFAP3P55082 362 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 FKBP3Q00688 224 aaKnown RBP10.9□□□□□ -0.66
VPS4B-207ENST00000591519 RPL6Q02878 288 aaKnown RBP10.9□□□□□ -0.66
VPS4B-207ENST00000591519 E2F5Q15329 346 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 BRICD5Q6PL45 260 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 ARMCX6Q7L4S7 300 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 BHLHA9Q7RTU4 235 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 PIP4P1Q86T03 277 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.66
VPS4B-207ENST00000591519 EEF2KMTQ96G04 330 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 PIWIL1Q96J94 861 aaKnown RBP10.9□□□□□ -0.66
VPS4B-207ENST00000591519 SLC2A11Q9BYW1 496 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 MMRN2Q9H8L6 949 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 ITM2CQ9NQX7 267 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 RMND1Q9NWS8 449 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 TOR4AQ9NXH8 423 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 PLK2Q9NYY3 685 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 THAP10Q9P2Z0 257 aaPredicted RBP10.9□□□□□ -0.66
VPS4B-207ENST00000591519 AGO1Q9UL18 857 aaKnown RBP10.9□□□□□ -0.66
VPS4B-207ENST00000591519 KIAA1257Q9ULG3 409 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 STON1Q9Y6Q2 735 aa10.9□□□□□ -0.66
VPS4B-207ENST00000591519 USP24Q9UPU5 2620 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 ZBED1O96006 694 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 CORO1AP31146 461 aaKnown RBP10.89□□□□□ -0.67
VPS4B-207ENST00000591519 TKTL1P51854 596 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 SLC8A3P57103 927 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 YWHAGP61981 247 aaKnown RBP eCLIP10.89□□□□□ -0.67
VPS4B-207ENST00000591519 GFPT1Q06210 699 aaPredicted RBP10.89□□□□□ -0.67
VPS4B-207ENST00000591519 ZNF252P-AS1Q0IIN9 211 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 EFEMP1Q12805 493 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 TRIP4Q15650 581 aaPredicted RBP10.89□□□□□ -0.67
VPS4B-207ENST00000591519 GEN1Q17RS7 908 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 UAP1L1Q3KQV9 507 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 CBWD6Q4V339 395 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 CBWD3Q5JTY5 395 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 CBWD5Q5RIA9 395 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 ZNF658Q5TYW1 1059 aaPredicted RBP10.89□□□□□ -0.67
VPS4B-207ENST00000591519 ANKRD40Q6AI12 368 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 SLC41A1Q8IVJ1 513 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 CYP4X1Q8N118 509 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 SCML4Q8N228 414 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 TRIML1Q8N9V2 468 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 SMARCE1Q969G3 411 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 ARID3AQ99856 593 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 GTPBP4Q9BZE4 634 aaKnown RBP10.89□□□□□ -0.67
VPS4B-207ENST00000591519 SLC32A1Q9H598 525 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 CACNA2D2Q9NY47 1150 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 MARCH2Q9P0N8 246 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 USP36Q9P275 1121 aaKnown RBP10.89□□□□□ -0.67
VPS4B-207ENST00000591519 STOML2Q9UJZ1 356 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 STRIP2Q9ULQ0 834 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 NFE2L3Q9Y4A8 694 aa10.89□□□□□ -0.67
VPS4B-207ENST00000591519 BIN1O00499 593 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 XPO1O14980 1071 aaKnown RBP10.88□□□□□ -0.67
VPS4B-207ENST00000591519 PMM2O15305 246 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 SLC16A3O15427 465 aaKnown RBP10.88□□□□□ -0.67
VPS4B-207ENST00000591519 SMC2O95347 1197 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 IGLV3-19P01714 112 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 CYBBP04839 570 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 CFIP05156 583 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 SYPP08247 313 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 UBE2HP62256 183 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 PDE4CQ08493 712 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 SLC14A1Q13336 389 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 CUL2Q13617 745 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 EIF4HQ15056 248 aaKnown RBP10.88□□□□□ -0.67
VPS4B-207ENST00000591519 CAMK4Q16566 473 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 FUT11Q495W5 492 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 RSRC2Q7L4I2 434 aaKnown RBP10.88□□□□□ -0.67
VPS4B-207ENST00000591519 DENND1CQ8IV53 801 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 DEFB119Q8N690 84 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 KDF1Q8NAX2 398 aaPredicted RBP10.88□□□□□ -0.67
VPS4B-207ENST00000591519 DEFB124Q8NES8 71 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 CADM4Q8NFZ8 388 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 UCMAQ8WVF2 138 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 KCTD13Q8WZ19 329 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 DNASE2BQ8WZ79 361 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 FOXJ1Q92949 421 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 BHMTQ93088 406 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 SLC35C1Q96A29 364 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 PLD4Q96BZ4 506 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 OLA1Q9NTK5 396 aaKnown RBP10.88□□□□□ -0.67
VPS4B-207ENST00000591519 DNAAF2Q9NVR5 837 aaKnown RBP10.88□□□□□ -0.67
VPS4B-207ENST00000591519 ELOVL2Q9NXB9 296 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 WSB2Q9NYS7 404 aaPredicted RBP10.88□□□□□ -0.67
VPS4B-207ENST00000591519 HOOK1Q9UJC3 728 aaKnown RBP10.88□□□□□ -0.67
VPS4B-207ENST00000591519 RASAL2Q9UJF2 1139 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 CYP8B1Q9UNU6 501 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 RAD54BQ9Y620 910 aa10.88□□□□□ -0.67
VPS4B-207ENST00000591519 PCDH15Q96QU1 1955 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 CEP295Q9C0D2 2601 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 SLC12A8A0AV02 714 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 FAM221BA6H8Z2 402 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 TULP2O00295 520 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 NDUFS2O75306 463 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 LATS1O95835 1130 aa10.87□□□□□ -0.67
VPS4B-207ENST00000591519 HMBSP08397 361 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms