RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 IL4RP24394 825 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 KPNA1P52294 538 aaPredicted RBP23.07■■□□□ 1.28
ATG4D-209ENST00000588857 ELF2Q15723 593 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 CYP1B1Q16678 543 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 C1orf54Q8WWF1 131 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 TSC1Q92574 1164 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 LRRC1Q9BTT6 524 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 MAGEB5Q9BZ81 275 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 ANLNQ9NQW6 1124 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 MAN1C1Q9NR34 630 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 DPP7Q9UHL4 492 aa23.07■■□□□ 1.28
ATG4D-209ENST00000588857 TUBP50607 506 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 TRIP4Q15650 581 aaPredicted RBP23.06■■□□□ 1.28
ATG4D-209ENST00000588857 ELMSAN1Q6PJG2 1045 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 GPR161Q8N6U8 529 aaKnown RBP23.06■■□□□ 1.28
ATG4D-209ENST00000588857 C12orf50Q8NA57 414 aaPredicted RBP23.06■■□□□ 1.28
ATG4D-209ENST00000588857 TTC13Q8NBP0 860 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 FAF2Q96CS3 445 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 RUNDC3BQ96NL0 473 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 LRRC19Q9H756 370 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 ZNF334Q9HCZ1 680 aaPredicted RBP23.06■■□□□ 1.28
ATG4D-209ENST00000588857 CWC15Q9P013 229 aaKnown RBP23.06■■□□□ 1.28
ATG4D-209ENST00000588857 R3HDM2Q9Y2K5 976 aaKnown RBP23.06■■□□□ 1.28
ATG4D-209ENST00000588857 EYSQ5T1H1 3165 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 SLC12A8A0AV02 714 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 PER2O15055 1255 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 CREB3O43889 395 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 ZMYND10O75800 440 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 APOEP02649 317 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 CCNG2Q16589 344 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 KLHDC10Q6PID8 442 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 MAATS1Q7Z4T9 603 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 RBM23Q86U06 439 aaKnown RBP23.06■■□□□ 1.28
ATG4D-209ENST00000588857 GDPD5Q8WTR4 605 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 SLC22A17Q8WUG5 538 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 HDAC7Q8WUI4 952 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 ATG4AQ8WYN0 398 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 CSPG4P5Q96PW8 444 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 HAPLN3Q96S86 360 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 DCLK3Q9C098 648 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 OR12D3Q9UGF7 316 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 SLC12A6Q9UHW9 1150 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 MTCH2Q9Y6C9 303 aa23.06■■□□□ 1.28
ATG4D-209ENST00000588857 I6L893 689 aaPredicted RBP23.05■■□□□ 1.28
ATG4D-209ENST00000588857 EEF2KO00418 725 aaKnown RBP23.05■■□□□ 1.28
ATG4D-209ENST00000588857 APOL1O14791 398 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 CCL16O15467 120 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 F11P03951 625 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 EPCAMP16422 314 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 GOT1P17174 413 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 FNTAP49354 379 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 ZNF135P52742 658 aaPredicted RBP23.05■■□□□ 1.28
ATG4D-209ENST00000588857 SNX1Q13596 522 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 CCDC137Q6PK04 289 aaKnown RBP23.05■■□□□ 1.28
ATG4D-209ENST00000588857 PCDH19Q8TAB3 1148 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 SLC39A13Q96H72 371 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 FCRL2Q96LA5 508 aaPredicted RBP23.05■■□□□ 1.28
ATG4D-209ENST00000588857 EPAS1Q99814 870 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 OSBPL2Q9H1P3 480 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 TLE6Q9H808 572 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 PRDM16Q9HAZ2 1276 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 AMACRQ9UHK6 382 aa23.05■■□□□ 1.28
ATG4D-209ENST00000588857 HBS1LQ9Y450 684 aaKnown RBP23.05■■□□□ 1.28
ATG4D-209ENST00000588857 KCNU1A8MYU2 1149 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 DAPK3O43293 454 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 COCHO43405 550 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 PAGE1O75459 146 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 MOCS2O96007 188 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-209ENST00000588857 ZFXP17010 805 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-209ENST00000588857 COILP38432 576 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-209ENST00000588857 DR1Q01658 176 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 TMEM150AQ86TG1 271 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 CCDC105Q8IYK2 499 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 PPM1EQ8WY54 764 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 HAUS1Q96CS2 278 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 GCNAQ96QF7 691 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 FRMD8P1Q9BZ68 369 aaPredicted RBP23.04■■□□□ 1.28
ATG4D-209ENST00000588857 SIK2Q9H0K1 926 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 EPC1Q9H2F5 836 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 IL21Q9HBE4 155 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 ASAH2Q9NR71 780 aa23.04■■□□□ 1.28
ATG4D-209ENST00000588857 SPDYE4A6NLX3 237 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 APOC4-APOC2K7ER74 178 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 RAD51CO43502 376 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 APOC2P02655 101 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 HMBSP08397 361 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 HNRNPA1P09651 372 aaKnown RBP eCLIP23.03■■□□□ 1.28
ATG4D-209ENST00000588857 GABRR2P28476 465 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 HOXA9P31269 272 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 TPI1P60174 286 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 MRPS25P82663 173 aaKnown RBP23.03■■□□□ 1.28
ATG4D-209ENST00000588857 RING1Q06587 406 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 DHX34Q14147 1143 aaKnown RBP23.03■■□□□ 1.28
ATG4D-209ENST00000588857 SLC9A4Q6AI14 798 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 TTC27Q6P3X3 843 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 PQLC3Q8N755 202 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 ATP6V0D2Q8N8Y2 350 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 P3H4Q92791 437 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 FAM118BQ9BPY3 351 aa23.03■■□□□ 1.28
ATG4D-209ENST00000588857 CORO1BQ9BR76 489 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms