RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ARHGEF2Q92974 986 aaKnown RBP11.5□□□□□ -0.57
SKA2-204ENST00000578519 C9orf72Q96LT7 481 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 SERPINB11Q96P15 392 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 DEFB118Q96PH6 123 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 CDK5RAP1Q96SZ6 601 aaKnown RBP11.5□□□□□ -0.57
SKA2-204ENST00000578519 SELENOSQ9BQE4 189 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 NSRP1Q9H0G5 558 aaKnown RBP11.5□□□□□ -0.57
SKA2-204ENST00000578519 CATSPERBQ9H7T0 1116 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 PAK6Q9NQU5 681 aaPredicted RBP11.5□□□□□ -0.57
SKA2-204ENST00000578519 ARHGEF4Q9NR80 690 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 ETNK2Q9NVF9 386 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 MTMR10Q9NXD2 777 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 NKIRAS1Q9NYS0 192 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 CACNG4Q9UBN1 327 aa11.5□□□□□ -0.57
SKA2-204ENST00000578519 A0A0A0MRY4 1105 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 GMNCA6NCL1 334 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 FGF10O15520 208 aaPredicted RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 MLNP12872 115 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 CCL5P13501 91 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 TFE3P19532 575 aaPredicted RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 STX2P32856 288 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 LSP1P33241 339 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 MMP13P45452 471 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 KPNA1P52294 538 aaPredicted RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 SLC5A3P53794 718 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 GDF10P55107 478 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 GEMIN4P57678 1058 aaKnown RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 IFRD2Q12894 506 aaPredicted RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 IKBKEQ14164 716 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 PRPSAP1Q14558 356 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 MBTPS1Q14703 1052 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 PPP2R5DQ14738 602 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 PARP6Q2NL67 630 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 FAM171A1Q5VUB5 890 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 SYPL2Q5VXT5 272 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 NCBP2-AS2Q69YL0 99 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 ITPRIPL1Q6GPH6 555 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 C3orf62Q6ZUJ4 267 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 ANKRD33Q7Z3H0 272 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 LRRC49Q8IUZ0 686 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 CCDC13Q8IYE1 715 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 LRRC43Q8N309 656 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 GLIS1Q8NBF1 620 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 CCNYQ8ND76 341 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 OR10T2Q8NGX3 314 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 BCAS4Q8TDM0 211 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 SH3TC2Q8TF17 1288 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 DYDC1Q8WWB3 177 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 LINC01599Q8WXQ3 324 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 NDRG1Q92597 394 aaKnown RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 SPATA13Q96N96 652 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 CYTH2Q99418 400 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 NAT9Q9BTE0 207 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 OSBPL7Q9BZF2 842 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 HIPK3Q9H422 1215 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 EIF2B3Q9NR50 452 aaKnown RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 PIGVQ9NUD9 493 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 INTS9Q9NV88 658 aaKnown RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 DNAJC17Q9NVM6 304 aaKnown RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 ABI2Q9NYB9 513 aaPredicted RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 DTLQ9NZJ0 730 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 FNIP2Q9P278 1114 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 PSMC3IPQ9P2W1 217 aaPredicted RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 TRHDEQ9UKU6 1024 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 SCML2Q9UQR0 700 aa11.49□□□□□ -0.57
SKA2-204ENST00000578519 PRG3Q9Y2Y8 225 aaPredicted RBP11.49□□□□□ -0.57
SKA2-204ENST00000578519 IQANK1A0A1B0GTG1 560 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 ERI2A8K979 691 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 EBAG9O00559 213 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 NDUFAB1O14561 156 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 PQBP1O60828 265 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 NBNO60934 754 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 EFCAB14O75071 495 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 CXCL10P02778 98 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 ERCC2P18074 760 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 FGFR3P22607 806 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 DNAJB2P25686 324 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 MSH2P43246 934 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 SLCO1A2P46721 670 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 ALDH7A1P49419 539 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 ATXN1P54253 815 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 AP1B1Q10567 949 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 MRPL58Q14197 206 aaKnown RBP11.48□□□□□ -0.57
SKA2-204ENST00000578519 KCNJ11Q14654 390 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 LONRF1Q17RB8 773 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 CCDC142Q17RM4 750 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 RAB6CQ53S08 254 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 TNFAIP8L3Q5GJ75 292 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 C1orf53Q5VUE5 145 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 FUT10Q6P4F1 479 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 LRRC31Q6UY01 552 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 SLC39A5Q6ZMH5 540 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 HFE2Q6ZVN8 426 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 PRUNE1Q86TP1 453 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 LRRTM3Q86VH5 581 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 CEP57Q86XR8 500 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 ATP6V0D2Q8N8Y2 350 aa11.48□□□□□ -0.57
SKA2-204ENST00000578519 FBXO36Q8NEA4 188 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms