RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 AMPHP49418 695 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 PGDP52209 483 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 TIAL1Q01085 375 aaKnown RBP eCLIP5.74□□□□□ -1.49
LINC00254-201ENST00000563416 E2F1Q01094 437 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 SLC10A2Q12908 348 aaPredicted RBP5.74□□□□□ -1.49
LINC00254-201ENST00000563416 STK3Q13188 491 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 L1TD1Q5T7N2 865 aaKnown RBP5.74□□□□□ -1.49
LINC00254-201ENST00000563416 NAPRTQ6XQN6 538 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 TRIM72Q6ZMU5 477 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 C11orf96Q7Z7L8 435 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 NTN5Q8WTR8 489 aaPredicted RBP5.74□□□□□ -1.49
LINC00254-201ENST00000563416 TRIM36Q9NQ86 728 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 DKK4Q9UBT3 224 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 AMFRQ9UKV5 643 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 KNSTRNQ9Y448 316 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 C5P01031 1676 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 COL24A1Q17RW2 1714 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 CICQ96RK0 1608 aaPredicted RBP5.74□□□□□ -1.49
LINC00254-201ENST00000563416 AOX1Q06278 1338 aa5.74□□□□□ -1.49
LINC00254-201ENST00000563416 LINC01548A6NM66 108 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 AP4M1O00189 453 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 CES2O00748 559 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 SNX2O60749 519 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 PMPCBO75439 489 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 CD19P15391 556 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 GATMP50440 423 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 PROK1P58294 105 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 TIRAPP58753 221 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 CYP4F2P78329 520 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 CYP1B1Q16678 543 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 KIAA1614Q5VZ46 1190 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 PLAG1Q6DJT9 500 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 SEMA6DQ8NFY4 1073 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 REPS1Q96D71 796 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 ZC3H10Q96K80 434 aaKnown RBP5.73□□□□□ -1.49
LINC00254-201ENST00000563416 PRR25Q96S07 402 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 TBC1D23Q9NUY8 699 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 POLKQ9UBT6 870 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 SERGEFQ9UGK8 458 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 CAPN11Q9UMQ6 739 aa5.73□□□□□ -1.49
LINC00254-201ENST00000563416 COL5A3P25940 1745 aaPredicted RBP5.73□□□□□ -1.49
LINC00254-201ENST00000563416 CASZ1Q86V15 1759 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 UBR2Q8IWV8 1755 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 MANSC4A6NHS7 340 aaPredicted RBP5.72□□□□□ -1.49
LINC00254-201ENST00000563416 F8W8V4 182 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 H7C1Q1 480 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 PIK3CBP42338 1070 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 C4orf46Q504U0 113 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 TMEM63BQ5T3F8 832 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 DPY19L3Q6ZPD9 716 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 SFTPA1Q8IWL2 248 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 CCDC33Q8N5R6 958 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 TERB1Q8NA31 727 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 PJA1Q8NG27 643 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 CYP2W1Q8TAV3 490 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 HEYLQ9NQ87 328 aaPredicted RBP5.72□□□□□ -1.49
LINC00254-201ENST00000563416 SNX15Q9NRS6 342 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 DNAJB11Q9UBS4 358 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 NKX1-2Q9UD57 310 aaPredicted RBP5.72□□□□□ -1.49
LINC00254-201ENST00000563416 UBR3Q6ZT12 1888 aa5.72□□□□□ -1.49
LINC00254-201ENST00000563416 LRP5O75197 1615 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 KDRP35968 1356 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 PARD3Q8TEW0 1356 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 POM121BA6NF01 834 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 SMIM22K7EJ46 135 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 KPNA5O15131 536 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 EXOC3O60645 756 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 PDE8BO95263 885 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 A1BGP04217 495 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 NBPF7P0C2Y1 421 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-201ENST00000563416 HGFP14210 728 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 ZNF37AP17032 561 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-201ENST00000563416 HTRA4P83105 476 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-201ENST00000563416 GRM1Q13255 1194 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 CERKLQ49MI3 558 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-201ENST00000563416 TMEM119Q4V9L6 283 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 PRAMEF17Q5VTA0 474 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 KSR2Q6VAB6 950 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 PTCHD4Q6ZW05 846 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 BEND5Q7L4P6 421 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 MORC1Q86VD1 984 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 ATP11CQ8NB49 1132 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 LTV1Q96GA3 475 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-201ENST00000563416 ZBTB45Q96K62 511 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-201ENST00000563416 LENG8Q96PV6 779 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-201ENST00000563416 HIST1H2AAQ96QV6 131 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 SNX18Q96RF0 628 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 MPHOSPH6Q99547 160 aaKnown RBP5.71□□□□□ -1.5
LINC00254-201ENST00000563416 THAP7Q9BT49 309 aaPredicted RBP5.71□□□□□ -1.5
LINC00254-201ENST00000563416 CIPCQ9C0C6 399 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 IGSF1Q8N6C5 1336 aa5.71□□□□□ -1.5
LINC00254-201ENST00000563416 HMGB1P1B2RPK0 211 aaPredicted RBP5.7□□□□□ -1.5
LINC00254-201ENST00000563416 UBE2Q2LH0YL09 131 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 EXOC5O00471 708 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 PMM2O15305 246 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 TMPRSS11DO60235 418 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 FGAP02671 866 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 CREB1P16220 341 aa5.7□□□□□ -1.5
LINC00254-201ENST00000563416 TNNT2P45379 298 aaPredicted RBP5.7□□□□□ -1.5
LINC00254-201ENST00000563416 CASP5P51878 434 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms