RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 MMEP08473 750 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 ZNF18P17022 549 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 GBP1P32455 592 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 SOX5P35711 763 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 STAT1P42224 750 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 ZNF445P59923 1031 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 RNASE9P60153 205 aaKnown RBP13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 CDK17Q00537 523 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 RING1Q06587 406 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 PTPN20Q4JDL3 420 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 RFWD3Q6PCD5 774 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 ERICH1Q86X53 443 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 CCDC117Q8IWD4 279 aaPredicted RBP13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 DHX40Q8IX18 779 aaKnown RBP13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 DEFB106AQ8N104 65 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 SUMF1Q8NBK3 374 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 PIWIL1Q96J94 861 aaKnown RBP13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 CIPCQ9C0C6 399 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 DDIT4Q9NX09 232 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 STIM2Q9P246 746 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 SIK3Q9Y2K2 1263 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 DAAM1Q9Y4D1 1078 aa13.49□□□□□ -0.25
CTDSPL2-209ENST00000560620 CCDC163A0A0D9SF12 145 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 TCRBV21S2A2A0A5A6 115 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 LRRC10BA6NIK2 292 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 PRRT4C9JH25 899 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 ACSL4O60488 711 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 TBL1XO60907 577 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 TRUB2O95900 331 aaKnown RBP13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 SERPINC1P01008 464 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 IGLV3-27P01718 113 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 GLI1P08151 1106 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 HOXB2P14652 356 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 NTSR1P30989 418 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC6A3Q01959 620 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 NME3Q13232 169 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 NNTQ13423 1086 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 ZC3H12AQ5D1E8 599 aaKnown RBP13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 FAM102AQ5T9C2 384 aaPredicted RBP13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 NAA35Q5VZE5 725 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 EGFLAMQ63HQ2 1017 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 TMEM92Q6UXU6 159 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 BEND5Q7L4P6 421 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 ANKS1BQ7Z6G8 1248 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 FAM217AQ8IXS0 508 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 DCLK2Q8N568 766 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 KCNV2Q8TDN2 545 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 EPS8L1Q8TE68 723 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC20A1Q8WUM9 679 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 UCMAQ8WVF2 138 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 HMGB4Q8WW32 186 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 GAB3Q8WWW8 586 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 CPA5Q8WXQ8 436 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 C18orf8Q96DM3 657 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 FCRL2Q96LA5 508 aaPredicted RBP13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 HSD3B7Q9H2F3 369 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 SEPT11Q9NVA2 429 aaKnown RBP13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC12A6Q9UHW9 1150 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 INVSQ9Y283 1065 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 PIEZO1Q92508 2521 aa13.48□□□□□ -0.25
CTDSPL2-209ENST00000560620 DMDP11532 3685 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 GOLGA8SH3BPF8 625 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 IRAK2O43187 625 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 LSM8O95777 96 aaKnown RBP13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 CISD3P0C7P0 127 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 ABCB4P21439 1286 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 PITX1P78337 314 aaPredicted RBP13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 GEN1Q17RS7 908 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 USP39Q53GS9 565 aaKnown RBP13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 LAIR1Q6GTX8 287 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 OLFML1Q6UWY5 402 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 ZDHHC17Q8IUH5 632 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 KIAA2013Q8IYS2 634 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 ATP6V0D2Q8N8Y2 350 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 MDGA1Q8NFP4 955 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 DDX1Q92499 740 aaKnown RBP13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 P2RY11Q96G91 374 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 ERGIC2Q96RQ1 377 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC2A11Q9BYW1 496 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 ASNSD1Q9NWL6 643 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 CACNA2D2Q9NY47 1150 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 STOML2Q9UJZ1 356 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 FBXO10Q9UK96 956 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 CLEC4EQ9ULY5 219 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC27A6Q9Y2P4 619 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 STARD13Q9Y3M8 1113 aa13.47□□□□□ -0.25
CTDSPL2-209ENST00000560620 GOLGA6L19H0YKK7 550 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 M0QYT0 321 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 TEX33O43247 280 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 ADAM23O75077 832 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC2A3P11169 496 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 HOXD9P28356 352 aaPredicted RBP13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 SLC6A4P31645 630 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 CCR1P32246 355 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 SGSHP51688 502 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 JAM2P57087 298 aa13.46□□□□□ -0.25
CTDSPL2-209ENST00000560620 CDR2Q01850 454 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms