RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ELOVL2Q9NXB9 296 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 CACNA2D2Q9NY47 1150 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 THAP10Q9P2Z0 257 aaPredicted RBP14.68□□□□□ -0.06
TPM1-223ENST00000560445 ABCA7Q8IZY2 2146 aa14.68□□□□□ -0.06
TPM1-223ENST00000560445 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 LNP1A1A4G5 178 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 TULP2O00295 520 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 CAPN9O14815 690 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 APOEP02649 317 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 ATP5BP06576 529 aaKnown RBP14.67□□□□□ -0.06
TPM1-223ENST00000560445 ACADMP11310 421 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 NDUFV2P19404 249 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 WASP42768 502 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 RGS7P49802 495 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 DUOXA1Q1HG43 343 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 TRIM61Q5EBN2 209 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 WDR45BQ5MNZ6 344 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 SERPINA13PQ6UXR4 307 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 BHLHA9Q7RTU4 235 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 TMEFF1Q8IYR6 380 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 HJURPQ8NCD3 748 aaPredicted RBP14.67□□□□□ -0.06
TPM1-223ENST00000560445 RLN3Q8WXF3 142 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 TFAP2BQ92481 460 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 PIWIL1Q96J94 861 aaKnown RBP14.67□□□□□ -0.06
TPM1-223ENST00000560445 LSM14BQ9BX40 385 aaKnown RBP14.67□□□□□ -0.06
TPM1-223ENST00000560445 PRDM16Q9HAZ2 1276 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 UBE2TQ9NPD8 197 aaPredicted RBP14.67□□□□□ -0.06
TPM1-223ENST00000560445 TMEM51Q9NW97 253 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 CEP83Q9Y592 693 aa14.67□□□□□ -0.06
TPM1-223ENST00000560445 TRIM24O15164 1050 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 SYPP08247 313 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 SLC2A3P11169 496 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 NCAM1P13591 858 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 GNA15P30679 374 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 MTIF2P46199 727 aaKnown RBP14.66□□□□□ -0.06
TPM1-223ENST00000560445 TBX4P57082 545 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 GFPT1Q06210 699 aaPredicted RBP14.66□□□□□ -0.06
TPM1-223ENST00000560445 ENPP2Q13822 863 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 EXOC3L4Q17RC7 722 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 CT47A1Q5JQC4 288 aaPredicted RBP14.66□□□□□ -0.06
TPM1-223ENST00000560445 PEAR1Q5VY43 1037 aaPredicted RBP14.66□□□□□ -0.06
TPM1-223ENST00000560445 PMF1Q6P1K2 205 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 SLC23A3Q6PIS1 610 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 TRIM65Q6PJ69 517 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 CREBRFQ8IUR6 639 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 PRCCQ92733 491 aaPredicted RBP14.66□□□□□ -0.06
TPM1-223ENST00000560445 FAM149B1Q96BN6 582 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 MRGPRX1Q96LB2 322 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 PCED1AQ9H1Q7 454 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 SLC32A1Q9H598 525 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 ZDHHC4Q9NPG8 344 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 APEX2Q9UBZ4 518 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 SFMBT1Q9UHJ3 866 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 SLC12A6Q9UHW9 1150 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 SLC6A14Q9UN76 642 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 TLR6Q9Y2C9 796 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 NFE2L3Q9Y4A8 694 aa14.66□□□□□ -0.06
TPM1-223ENST00000560445 IGHV1OR15-9A0A0B4J2B8 117 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 THAP12O43422 761 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 LETM1O95202 739 aaPredicted RBP14.65□□□□□ -0.06
TPM1-223ENST00000560445 MOCS3O95396 460 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 IGLV3-27P01718 113 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 CFIP05156 583 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 HOXD9P28356 352 aaPredicted RBP14.65□□□□□ -0.06
TPM1-223ENST00000560445 CD6P30203 668 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 BPIFB4P59827 614 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 ZBTB16Q05516 673 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 ZNF33AQ06730 810 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 ZNF234Q14588 700 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 CAMK4Q16566 473 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 GEN1Q17RS7 908 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 FNDC3BQ53EP0 1204 aaKnown RBP14.65□□□□□ -0.06
TPM1-223ENST00000560445 TCEAL6Q6IPX3 200 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 ARMCX6Q7L4S7 300 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 ARHGEF19Q8IW93 802 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 HDDC3Q8N4P3 179 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.65□□□□□ -0.06
TPM1-223ENST00000560445 TCEAL3Q969E4 200 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 SIPA1Q96FS4 1042 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 PPP1R9BQ96SB3 815 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 ACOX2Q99424 681 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 ZDHHC5Q9C0B5 715 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 MIS12Q9H081 205 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 SMOC1Q9H4F8 434 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 THAP9Q9H5L6 903 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 MBD1Q9UIS9 605 aaPredicted RBP14.65□□□□□ -0.06
TPM1-223ENST00000560445 PILRBQ9UKJ0 227 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 CYP8B1Q9UNU6 501 aa14.65□□□□□ -0.06
TPM1-223ENST00000560445 C4orf47A7E2U8 309 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 RNF225M0QZC1 329 aaPredicted RBP14.64□□□□□ -0.07
TPM1-223ENST00000560445 TM4SF5O14894 197 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 ACSL4O60488 711 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 ASLP04424 464 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 EPHX1P07099 455 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 GLI1P08151 1106 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 SERPINF2P08697 491 aa14.64□□□□□ -0.07
TPM1-223ENST00000560445 PABPC1P11940 636 aaKnown RBP14.64□□□□□ -0.07
TPM1-223ENST00000560445 POLR2EP19388 210 aaKnown RBP14.64□□□□□ -0.07
TPM1-223ENST00000560445 CSRP1P21291 193 aaKnown RBP14.64□□□□□ -0.07
TPM1-223ENST00000560445 ERCC5P28715 1186 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms