RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ADH5P11766 374 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 FECHP22830 423 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 GJA4P35212 333 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 RDXP35241 583 aaKnown RBP14.22□□□□□ -0.13
SHMT2-234ENST00000557703 FLT3P36888 993 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 EIF4A3P38919 411 aaKnown RBP14.22□□□□□ -0.13
SHMT2-234ENST00000557703 RPS9P46781 194 aaKnown RBP14.22□□□□□ -0.13
SHMT2-234ENST00000557703 ZNF143P52747 638 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-234ENST00000557703 RNASE9P60153 205 aaKnown RBP14.22□□□□□ -0.13
SHMT2-234ENST00000557703 MAMLD1Q13495 774 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 ARL13BQ3SXY8 428 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 MPPE1Q53F39 396 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 TMEM31Q5JXX7 168 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 PPP1R15BQ5SWA1 713 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 CCDC122Q5T0U0 273 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 TTC39BQ5VTQ0 682 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-234ENST00000557703 MAMSTRQ6ZN01 415 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 TPRG1Q6ZUI0 275 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 FBXL6Q8N531 539 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 KCNV2Q8TDN2 545 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 RNF34Q969K3 372 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 PBXIP1Q96AQ6 731 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 ZFYVE19Q96K21 471 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 C1orf74Q96LT6 269 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 HAPLN3Q96S86 360 aa14.22□□□□□ -0.13
SHMT2-234ENST00000557703 NHEJ1Q9H9Q4 299 aaPredicted RBP14.22□□□□□ -0.13
SHMT2-234ENST00000557703 METTL5Q9NRN9 209 aaKnown RBP14.22□□□□□ -0.13
SHMT2-234ENST00000557703 EIF3CLB5ME19 914 aaKnown RBP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 GFRA2O00451 464 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 CACNG3O60359 315 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 PENKP01210 267 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 H2AFZP0C0S5 128 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 ARSAP15289 507 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 GPD1P21695 349 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 RRM1P23921 792 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 RFC1P35251 1148 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 CYLC1P35663 651 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 DEUP1Q05D60 604 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 TNK2Q07912 1038 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 GRSF1Q12849 480 aaKnown RBP eCLIP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 LRRC32Q14392 662 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 LY6G5CQ5SRR4 150 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 TRIM68Q6AZZ1 485 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 ASTLQ6HA08 431 aaPredicted RBP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 H2AFVQ71UI9 128 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 TXLNBQ8N3L3 684 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 TTC16Q8NEE8 873 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 RXFP2Q8WXD0 754 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 CLDN23Q96B33 292 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 TMA16Q96EY4 203 aaKnown RBP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 CALR3Q96L12 384 aaKnown RBP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 PPP1R9BQ96SB3 815 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 EIF3CQ99613 913 aaKnown RBP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 PRRX2Q99811 253 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 TBC1D17Q9HA65 648 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 ARHGEF38Q9NXL2 777 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 TAS2R14Q9NYV8 317 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 UVRAGQ9P2Y5 699 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 CNOT8Q9UFF9 292 aaKnown RBP14.21□□□□□ -0.13
SHMT2-234ENST00000557703 FBXO10Q9UK96 956 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 CA14Q9ULX7 337 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 NENFQ9UMX5 172 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 SIT1Q9Y3P8 196 aa14.21□□□□□ -0.13
SHMT2-234ENST00000557703 TMEM191CA6NGB0 347 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 TMCO5BA8MYB1 307 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 MSI1O43347 362 aaKnown RBP14.2□□□□□ -0.14
SHMT2-234ENST00000557703 IPO7O95373 1038 aaKnown RBP14.2□□□□□ -0.14
SHMT2-234ENST00000557703 LCA5LO95447 670 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 CYP1A2P05177 515 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 HMBSP08397 361 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 PLEKP08567 350 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-234ENST00000557703 AOC1P19801 751 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 SULT1E1P49888 294 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 MRE11P49959 708 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 OXCT1P55809 520 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 CCDC14Q49A88 953 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 HSF5Q4G112 596 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-234ENST00000557703 C2CD6Q53TS8 623 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 ZC3H12AQ5D1E8 599 aaKnown RBP14.2□□□□□ -0.14
SHMT2-234ENST00000557703 TMEM196Q5HYL7 178 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 RNF43Q68DV7 783 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 CCDC117Q8IWD4 279 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-234ENST00000557703 ST13P5Q8NFI4 369 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-234ENST00000557703 PJA1Q8NG27 643 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 CTNNBL1Q8WYA6 563 aaPredicted RBP14.2□□□□□ -0.14
SHMT2-234ENST00000557703 ANP32BQ92688 251 aaKnown RBP14.2□□□□□ -0.14
SHMT2-234ENST00000557703 CD101Q93033 1021 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 ZNF653Q96CK0 615 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 P2RY13Q9BPV8 354 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 BBS2Q9BXC9 721 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 KCNH6Q9H252 994 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 LTB4R2Q9NPC1 389 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 DEC1Q9P2X7 70 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 SLC27A6Q9Y2P4 619 aa14.2□□□□□ -0.14
SHMT2-234ENST00000557703 TICRRQ7Z2Z1 1910 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 OTOL1A6NHN0 477 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-234ENST00000557703 STK25O00506 426 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 NPC1O15118 1278 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 TIMM44O43615 452 aa14.19□□□□□ -0.14
SHMT2-234ENST00000557703 RNF8O76064 485 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms