RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 ADGRF1Q5T601 910 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 TPGS1Q6ZTW0 290 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 CCDC170Q8IYT3 715 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 CPXM2Q8N436 756 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 NT5C3BQ969T7 300 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 AZIN2Q96A70 460 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 PGAP3Q96FM1 320 aaPredicted RBP14.38□□□□□ -0.11
TUBB3-202ENST00000553656 BTN2A3PQ96KV6 586 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 BAG1Q99933 345 aaPredicted RBP14.38□□□□□ -0.11
TUBB3-202ENST00000553656 CNPY3Q9BT09 278 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 BBS2Q9BXC9 721 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 EPHX3Q9H6B9 360 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 WDCPQ9H6R7 721 aa14.38□□□□□ -0.11
TUBB3-202ENST00000553656 KRBA1A5PL33 1030 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 NEDD8-MDP1E9PL57 170 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 PSMA2P25787 234 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 GJA4P35212 333 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 SOX9P48436 509 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 ZNF143P52747 638 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-202ENST00000553656 GALCP54803 685 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 VCPP55072 806 aaKnown RBP14.37□□□□□ -0.11
TUBB3-202ENST00000553656 RPL7AP62424 266 aaKnown RBP14.37□□□□□ -0.11
TUBB3-202ENST00000553656 CCDC14Q49A88 953 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 PPP1R15BQ5SWA1 713 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 C10orf76Q5T2E6 689 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 TRNP1Q6NT89 227 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 RHBDF2Q6PJF5 856 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 STRADAQ7RTN6 431 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 CHSY1Q86X52 802 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 TMEM25Q86YD3 366 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 FLCNQ8NFG4 579 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 FAM172AQ8WUF8 416 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 FAM3CQ92520 227 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 XPO6Q96QU8 1125 aaKnown RBP14.37□□□□□ -0.11
TUBB3-202ENST00000553656 TBC1D17Q9HA65 648 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 PIGVQ9NUD9 493 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 NENFQ9UMX5 172 aa14.37□□□□□ -0.11
TUBB3-202ENST00000553656 OTOL1A6NHN0 477 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 KCNU1A8MYU2 1149 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 HOXC11O43248 304 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 CYP1A2P05177 515 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 TFE3P19532 575 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 CXCR3P49682 368 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 STARD6P59095 220 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 EIF4EBP2Q13542 120 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 UBXN2BQ14CS0 331 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 C15orf59Q2T9L4 293 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 ARL13BQ3SXY8 428 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 PREPLQ4J6C6 727 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 MPPE1Q53F39 396 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 IER5LQ5T953 404 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 OTUD1Q5VV17 481 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 FAM131BQ86XD5 332 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 FAM217AQ8IXS0 508 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 DDI1Q8WTU0 396 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 BHMTQ93088 406 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 PBXIP1Q96AQ6 731 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 NELL2Q99435 816 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 NUP85Q9BW27 656 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 C1QTNF1Q9BXJ1 281 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 IRX2Q9BZI1 471 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 TKTL2Q9H0I9 626 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 MARK1Q9P0L2 795 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 CTTNBP2NLQ9P2B4 639 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 STOML2Q9UJZ1 356 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 NDRG2Q9UN36 371 aaKnown RBP14.36□□□□□ -0.11
TUBB3-202ENST00000553656 VCANP13611 3396 aa14.36□□□□□ -0.11
TUBB3-202ENST00000553656 COL4A2P08572 1712 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 KANSL1LA0AUZ9 987 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 TMEM191CA6NGB0 347 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 SOWAHDA6NJG2 315 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 F5H5T6 163 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 NCAM2O15394 837 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 CCP110O43303 1012 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 NRDCO43847 1150 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 RNF8O76064 485 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 TMEM253P0C7T8 217 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 TYRP14679 529 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 FECHP22830 423 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 GRSF1Q12849 480 aaKnown RBP eCLIP14.35□□□□□ -0.11
TUBB3-202ENST00000553656 ACBD5Q5T8D3 534 aaPredicted RBP14.35□□□□□ -0.11
TUBB3-202ENST00000553656 RAP1GAP2Q684P5 730 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 SCYL2Q6P3W7 929 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 CCDC117Q8IWD4 279 aaPredicted RBP14.35□□□□□ -0.11
TUBB3-202ENST00000553656 SUGP1Q8IWZ8 645 aaKnown RBP14.35□□□□□ -0.11
TUBB3-202ENST00000553656 HJURPQ8NCD3 748 aaPredicted RBP14.35□□□□□ -0.11
TUBB3-202ENST00000553656 FNIP1Q8TF40 1166 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 CD101Q93033 1021 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 TMA16Q96EY4 203 aaKnown RBP14.35□□□□□ -0.11
TUBB3-202ENST00000553656 P2RY13Q9BPV8 354 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 NCAPGQ9BPX3 1015 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 ARHGEF38Q9NXL2 777 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 CALCOCO1Q9P1Z2 691 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 UVRAGQ9P2Y5 699 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 ANAPC7Q9UJX3 599 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 INTUQ9ULD6 942 aa14.35□□□□□ -0.11
TUBB3-202ENST00000553656 GOLGA6L7A0A1B0GV03 622 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 FAM86C2PA6NEL3 165 aa14.34□□□□□ -0.11
TUBB3-202ENST00000553656 EIF3CLB5ME19 914 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms