RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 EBF3Q9H4W6 596 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 ASB7Q9H672 318 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 IFT122Q9HBG6 1241 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 NGRNQ9NPE2 291 aaKnown RBP10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 MORF4L1Q9UBU8 362 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 SSX2IPQ9Y2D8 614 aa10.19□□□□□ -0.78
SMARCD1-205ENST00000548573 INO80B-WBP1J3KQ70 363 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PIK3R2O00459 728 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 LGR5O75473 907 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 LYPLA1O75608 230 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 GRAP2O75791 330 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 STAU1O95793 577 aaKnown RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 TOP3BO95985 862 aaKnown RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 ALDOAP04075 364 aaKnown RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PFKMP08237 780 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 UQCRBP14927 111 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 CYP3A5P20815 502 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 CYP2F1P24903 491 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 IDH3AP50213 366 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 SH3BGRP55822 239 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 RPL10AP62906 217 aaKnown RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 MBTD1Q05BQ5 628 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 DEUP1Q05D60 604 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 MED21Q13503 144 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 CCNIQ14094 377 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PDE1CQ14123 709 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 GRM2Q14416 872 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PCLAFQ15004 111 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 DPYSL2Q16555 572 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 CNPY1Q3B7I2 92 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 FAM182AQ5T1J6 154 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 MAP3K21Q5TCX8 1036 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 JADE1Q6IE81 842 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 C16orf46Q6P387 395 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 OLFML1Q6UWY5 402 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PACS1Q6VY07 963 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 RNF111Q6ZNA4 994 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PLPPR4Q7Z2D5 763 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PIP4K2CQ8TBX8 421 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PYDC1Q8WXC3 89 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 HPDLQ96IR7 371 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 QKIQ96PU8 341 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 WRNIP1Q96S55 665 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 GORASP1Q9BQQ3 440 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 NFKBIZQ9BYH8 718 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 INO80BQ9C086 356 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 VCX3AQ9NNX9 186 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 GTF2IRD1Q9UHL9 959 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 CDH22Q9UJ99 828 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 GPR25O00155 361 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 TPP1O14773 563 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 CASQ2O14958 399 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PEX1O43933 1283 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 MAP3K6O95382 1288 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 STAG3L1P0CL83 205 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 SETSIPP0DME0 302 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 RPS12P25398 132 aaKnown RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 PRDX6P30041 224 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 HARS2P49590 506 aaKnown RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 ERFP50548 548 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 NDST1P52848 882 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC6A3Q01959 620 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 TNFAIP2Q03169 654 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 CUL3Q13618 768 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 RALGPS1Q5JS13 557 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 DPH6Q7L8W6 267 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 MAVSQ7Z434 540 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 CDR2LQ86X02 465 aaPredicted RBP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 HACE1Q8IYU2 909 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC26A7Q8TE54 656 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 KHSRPQ92945 711 aaKnown RBP eCLIP10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 SORT1Q99523 831 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 NT5C1AQ9BXI3 368 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 HACL1Q9UJ83 578 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 COMMD3-BMI1R4GMX3 469 aa10.18□□□□□ -0.78
SMARCD1-205ENST00000548573 ZNF195O14628 629 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 AP1G1O43747 822 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 PROCP04070 461 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 PABPC4LP0CB38 370 aaKnown RBP10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 MCF2P10911 925 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 KCNA4P22459 653 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 ACAT1P24752 427 aaKnown RBP10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 FDFT1P37268 417 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 GRIA1P42261 906 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 RPS6KA3P51812 740 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 HDAC4P56524 1084 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 GBE1Q04446 702 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 SLC10A2Q12908 348 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 SFT2D3Q587I9 215 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 PPP6R3Q5H9R7 873 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 CFAP157Q5JU67 520 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 PDPK2PQ6A1A2 396 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 HEATR6Q6AI08 1181 aaKnown RBP10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 LRRC8BQ6P9F7 803 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 KCNT2Q6UVM3 1135 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 DENND5BQ6ZUT9 1274 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 SDCCAG8Q86SQ7 713 aaPredicted RBP10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 TMEM110Q86TL2 294 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 ZDHHC17Q8IUH5 632 aa10.17□□□□□ -0.78
SMARCD1-205ENST00000548573 NME8Q8N427 588 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms