RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 SPATA13Q96N96 652 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 GAD1Q99259 594 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 PIGVQ9NUD9 493 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 MIOSQ9NXC5 875 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 ST3GAL5Q9UNP4 418 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 SCN10AQ9Y5Y9 1956 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 CHUKO15111 745 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 CREB3O43889 395 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 KRT16P08779 473 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 SKIV2L2P42285 1042 aaKnown RBP19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 OVGP1Q12889 678 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 SETDB1Q15047 1291 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 TAF2Q6P1X5 1199 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 CHSY1Q86X52 802 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 RASAL3Q86YV0 1011 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 LPPQ93052 612 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 WNT8BQ93098 351 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 APBA2Q99767 749 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 XAB2Q9HCS7 855 aaKnown RBP19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 FAM105AQ9NUU6 356 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 TMEM30AQ9NV96 361 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 PCDHA11Q9Y5I1 949 aa19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 TIMM13Q9Y5L4 95 aaPredicted RBP19.13■□□□□ 0.65
PRPF40B-208ENST00000548436 FAM159BA6NKW6 160 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 KRT37O76014 449 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 FAM163BP0C2L3 166 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 C6orf222P0C671 652 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 FAM200BP0CF97 657 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 CLCNKBP51801 687 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 BMPR2Q13873 1038 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 PRKD1Q15139 912 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 NBPF20Q3BBV1 942 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 BZW1Q7L1Q6 419 aaKnown RBP19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 COLGALT1Q8NBJ5 622 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 C3orf58Q8NDZ4 430 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 TRPV1Q8NER1 839 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 TTC17Q96AE7 1141 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 OXNAD1Q96HP4 312 aaPredicted RBP19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 SRPK1Q96SB4 655 aaKnown RBP19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 CEP41Q9BYV8 373 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 ULBP1Q9BZM6 244 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 KANSL3Q9P2N6 904 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 STAP1Q9ULZ2 295 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 MYBPHLA2RUH7 354 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 H3BRJ5 948 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 RFPL1O75677 317 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 DCTN3O75935 186 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 ALDH3A1P30838 453 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 DEUP1Q05D60 604 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 AP1B1Q10567 949 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 GPRIN1Q7Z2K8 1008 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 TP53INP2Q8IXH6 220 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 RFWD2Q8NHY2 731 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 P2RY11Q96G91 374 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 KCNK16Q96T55 309 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 SMOQ99835 787 aa19.12■□□□□ 0.65
PRPF40B-208ENST00000548436 HMX2A2RU54 273 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 YJEFN3A6XGL0 299 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 E7ENQ6 273 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 RNF103O00237 685 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 COPEO14579 308 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 BGNP21810 368 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 FDFT1P37268 417 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 ZNF157P51786 506 aaPredicted RBP19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 CACNA2D1P54289 1103 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 DPYSQ14117 519 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 FYB2Q5VWT5 728 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 CTU1Q7Z7A3 348 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 PDCD7Q8N8D1 485 aaKnown RBP19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 ADAM32Q8TC27 787 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 PCED1BQ96HM7 432 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 SYT15Q9BQS2 421 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 NOD2Q9HC29 1040 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 ANLNQ9NQW6 1124 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 SLC38A7Q9NVC3 462 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 BAIAP2L1Q9UHR4 511 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 TRPV2Q9Y5S1 764 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 NUMBLQ9Y6R0 609 aa19.11■□□□□ 0.65
PRPF40B-208ENST00000548436 NUP205Q92621 2012 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 FAM72CH0Y354 149 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 I6L893 689 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 C2CD2LO14523 706 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 AMHP03971 560 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 THP07101 528 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 CTSHP09668 335 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 AKR1A1P14550 325 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 SERPINB4P48594 390 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 GLUD2P49448 558 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 DAOAP59103 153 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 CRADDP78560 199 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 FAM72AQ5TYM5 149 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 GDF6Q6KF10 455 aaPredicted RBP19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 FAM72DQ6L9T8 149 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 NLRP9Q7RTR0 991 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 FAM35AQ86V20 835 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 FAM72BQ86X60 149 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 UNC5BQ8IZJ1 945 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 ZMIZ2Q8NF64 920 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 SLC7A14Q8TBB6 771 aa19.1■□□□□ 0.65
PRPF40B-208ENST00000548436 TSSK1BQ9BXA7 367 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms