RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 KCNK10P57789 538 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 MTA1Q13330 715 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CSHL1Q14406 222 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CCDC85BQ15834 202 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 FBXO22Q8NEZ5 403 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 FLCNQ8NFG4 579 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 APBB2Q92870 758 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 RRP15Q9Y3B9 282 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 KNDC1Q76NI1 1749 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CYP3A7-CYP3A51PA0A087WV96 503 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 NEDD8-MDP1E9PL57 170 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 PSMD12O00232 456 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 CA12O43570 354 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CYP3A7P24462 503 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CAPZA2P47755 286 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 EIF2B5Q13144 721 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 ITGB3BPQ13352 177 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 ARMC12Q5T9G4 340 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 MTSS1LQ765P7 747 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 SH2D3CQ8N5H7 860 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 C18orf25Q96B23 403 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 FAR2Q96K12 515 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 TUBGCP4Q9UGJ1 667 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 SMAPO00193 183 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CCNT2O60583 730 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 EFCAB14O75071 495 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 DUSP11O75319 330 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 IL1BP01584 269 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 OR4Q2P0C623 313 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 GZMAP12544 262 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 GLUD2P49448 558 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 C15orf59Q2T9L4 293 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 GPR158Q5T848 1215 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 IRAK1BP1Q5VVH5 260 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 SH3BP5LQ7L8J4 393 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 MIER2Q8N344 545 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 PRPF18Q99633 342 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 MRPL45Q9BRJ2 306 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 BBS2Q9BXC9 721 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 MRPL1Q9BYD6 325 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 BRD9Q9H8M2 597 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 NDE1Q9NXR1 346 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 UTP6Q9NYH9 597 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 SHOC2Q9UQ13 582 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CNTNAP1P78357 1384 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 PJA2O43164 708 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CDH16O75309 829 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 LUC7L3O95232 432 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 IL10P22301 178 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 RPL9P32969 192 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 MMP13P45452 471 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 MARSP56192 900 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 C21orf59P57076 290 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 PTENP60484 403 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 DUSP4Q13115 394 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 TEDDM1Q5T9Z0 273 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 USP45Q70EL2 814 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 TMEM161BQ8NDZ6 487 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 EXD1Q8NHP7 514 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 SPATA20Q8TB22 786 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 NRBF2Q96F24 287 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 TTPALQ9BTX7 342 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 AGXT2Q9BYV1 514 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 PADI3Q9ULW8 664 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 KIF13AQ9H1H9 1805 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 NFAT5O94916 1531 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 COL1A2P08123 1366 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 WDR27A2RRH5 827 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 AIM2O14862 343 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 ALDH9A1P49189 494 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 HDAC4P56524 1084 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 XRCC4Q13426 336 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CES3Q6UWW8 571 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 BTNL9Q6UXG8 535 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 TRAPPC5Q8IUR0 188 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 KCNV2Q8TDN2 545 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 ING5Q8WYH8 240 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 TMEM159Q96B96 161 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 TCF25Q9BQ70 676 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 EIF3LQ9Y262 564 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 GNG14A0A1W2PPG7 69 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 ERI2A8K979 691 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 F8VP50 259 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 NCAM2O15394 837 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 KATNA1O75449 491 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 TOMM70O94826 608 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 CPSF4O95639 269 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 EEF1DP29692 281 aaKnown RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 FNTAP49354 379 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 ZNF280AP59817 542 aaPredicted RBP5.5□□□□□ -1.53
LRP6-203ENST00000538239 SYTL1Q8IYJ3 562 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 SCLYQ96I15 445 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 GPAMQ9HCL2 828 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 NMRK1Q9NWW6 199 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 ZNHIT2Q9UHR6 403 aa5.5□□□□□ -1.53
LRP6-203ENST00000538239 ATP5HO75947 161 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CCL5P13501 91 aa5.49□□□□□ -1.53
LRP6-203ENST00000538239 CYP2A7P20853 494 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms