RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 NCAPGQ9BPX3 1015 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 PLCD4Q9BRC7 762 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 FAM167BQ9BTA0 163 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 ST3GAL5Q9UNP4 418 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 CDY2AQ9Y6F7 541 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 TEX264Q9Y6I9 313 aa8.99□□□□□ -0.97
UBE3B-208ENST00000538070 NUP205Q92621 2012 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 MAP2K2P36507 400 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 TPI1P60174 286 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 BNIP1Q12981 228 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 CCDC6Q16204 474 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 TTC39BQ5VTQ0 682 aaPredicted RBP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 P2RY11Q96G91 374 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 NFKBIZQ9BYH8 718 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 KATNBL1Q9H079 304 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 TSPYL2Q9H2G4 693 aaPredicted RBP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 PIGVQ9NUD9 493 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 TXLNGQ9NUQ3 528 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 ZNF358Q9NW07 568 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 RPS6KL1Q9Y6S9 549 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 LAMA3Q16787 3333 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 TRIP12Q14669 1992 aaPredicted RBP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 SLC15A5A6NIM6 579 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 F8W810 466 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 KRT38O76015 456 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 HAUS5O94927 633 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 APOEP02649 317 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 TGM2P21980 687 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 PTPN7P35236 360 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 GRB14Q14449 540 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 ACAP1Q15027 740 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 GPRIN1Q7Z2K8 1008 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 CMC1Q7Z7K0 106 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 LINC01465Q8N7H1 131 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 GBP7Q8N8V2 638 aaPredicted RBP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 BANPQ8N9N5 519 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 SLC44A1Q8WWI5 657 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 ZNF669Q96BR6 464 aaPredicted RBP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 FERMT1Q9BQL6 677 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 ARHGEF4Q9NR80 690 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 MIOSQ9NXC5 875 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 EURLQ9NYK6 297 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 ZFATQ9P243 1243 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 CPSF2Q9P2I0 782 aaKnown RBP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 EFR3BQ9Y2G0 817 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 PARP14Q460N5 1801 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 PRPF4O43172 522 aaKnown RBP eCLIP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 ENTPD5O75356 428 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 DCTN3O75935 186 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 OR4Q2P0C623 313 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 ESRRAP11474 423 aaPredicted RBP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 CACNA2D1P54289 1103 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 SARNPP82979 210 aaKnown RBP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 MAP2K5Q13163 448 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 EFHC1Q5JVL4 640 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 RASSF3Q86WH2 238 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 HIPK4Q8NE63 616 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 N4BP2L2Q92802 583 aaPredicted RBP8.98□□□□□ -0.97
UBE3B-208ENST00000538070 SYT15Q9BQS2 421 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 STAP1Q9ULZ2 295 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 ACTL7BQ9Y614 415 aa8.98□□□□□ -0.97
UBE3B-208ENST00000538070 NDC80O14777 642 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 CHADO15335 359 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 ANP32DO95626 131 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 JCHAINP01591 159 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 NPR3P17342 541 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 TYK2P29597 1187 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 MATKP42679 507 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 SLC20A2Q08357 652 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 BST1Q10588 318 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 FAM110CQ1W6H9 321 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 NCBP2-AS2Q69YL0 99 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 PNPLA1Q8N8W4 532 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 TTC8Q8TAM2 541 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 GPR152Q8TDT2 470 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 GRAMD1AQ96CP6 724 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 APOPT1Q96IL0 206 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 CAB39LQ9H9S4 337 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 PLEKHA5Q9HAU0 1116 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 POPDC2Q9HBU9 364 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 SYBUQ9NX95 663 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 PSAT1Q9Y617 370 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 ATXN2Q99700 1313 aaKnown RBP8.97□□□□□ -0.97
UBE3B-208ENST00000538070 H3BRJ5 948 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 GYG2O15488 501 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 UPP2O95045 317 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 OAS1P00973 400 aaKnown RBP8.97□□□□□ -0.97
UBE3B-208ENST00000538070 ERCC2P18074 760 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 CD52P31358 61 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 AVPR1AP37288 418 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 ITKQ08881 620 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 NBPF20Q3BBV1 942 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 RELL1Q8IUW5 271 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 TTC39CQ8N584 583 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 LRRC52Q8N7C0 313 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 ANKLE1Q8NAG6 615 aa8.97□□□□□ -0.97
UBE3B-208ENST00000538070 SMG8Q8ND04 991 aaKnown RBP8.97□□□□□ -0.97
UBE3B-208ENST00000538070 E2F7Q96AV8 911 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms