RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 REEP2Q9BRK0 252 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 SEMA6BQ9H3T3 888 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ARMC7Q9H6L4 198 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 VTA1Q9NP79 307 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ANAPC7Q9UJX3 599 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 EXOC7Q9UPT5 735 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 PIN4Q9Y237 131 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 EFR3BQ9Y2G0 817 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM32AQ9Y421 112 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ESYT2A0FGR8 921 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 SNTNA6NMZ2 147 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 C16orf96A6NNT2 1141 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 BTNL10A8MVZ5 291 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 AREL1O15033 823 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 HSPA4LO95757 839 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 PROCP04070 461 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 SMPD1P17405 629 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 DDX5P17844 614 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 FOXN2P32314 431 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ACOT2P49753 483 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 INHBCP55103 352 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 GSTM4Q03013 218 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 DLG1Q12959 904 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 COASYQ13057 564 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 KRR1Q13601 381 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 EPHA7Q15375 998 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 CHI3L2Q15782 390 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ZNF829Q3KNS6 432 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 CCDC14Q49A88 953 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 WDR45BQ5MNZ6 344 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 TMTC4Q5T4D3 741 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 CASC4Q6P4E1 433 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 DNAJC14Q6Y2X3 702 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 PCGF5Q86SE9 256 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 AHI1Q8N157 1196 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 PQLC1Q8N2U9 271 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ST13P5Q8NFI4 369 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 HELQQ8TDG4 1101 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 TCP10LQ8TDR4 215 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 TRIB2Q92519 343 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 MCRS1Q96EZ8 462 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 CLPTM1LQ96KA5 538 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 APBA2Q99767 749 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 RNF38Q9H0F5 515 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 VPS11Q9H270 941 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 KIAA1586Q9HCI6 787 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 AASDHPPTQ9NRN7 309 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ERAP1Q9NZ08 941 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 RAB26Q9ULW5 256 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 COL11A2P13942 1736 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 MYH10P35580 1976 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 SLC15A5A6NIM6 579 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 PIK3CDO00329 1044 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 TEX28O15482 410 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 AKAP10O43572 662 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 CCNE2O96020 404 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 TFPTP0C1Z6 253 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ARSEP51690 589 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 SLC25A3Q00325 362 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 LAMC2Q13753 1193 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 SPDYAQ5MJ70 313 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 PPP2R2DQ66LE6 453 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 TTC30AQ86WT1 665 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 RASGEF1CQ8N431 466 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 TTC39CQ8N584 583 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ALLCQ8N6M5 410 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 GLIS3Q8NEA6 775 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM172AQ8WUF8 416 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 SOCS4Q8WXH5 440 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 SLC7A6OSQ96CW6 309 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 CEP19Q96LK0 163 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 CHID1Q9BWS9 393 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 UNC93B1Q9H1C4 597 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 RNPEPQ9H4A4 650 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 RAD21L1Q9H4I0 556 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 SMARCAD1Q9H4L7 1026 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 UBE2TQ9NPD8 197 aaPredicted RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 KCNK4Q9NYG8 393 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 COPG2Q9UBF2 871 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 NXF1Q9UBU9 619 aaKnown RBP6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 PCYOX1Q9UHG3 505 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 ZMYM2Q9UBW7 1377 aa6.98□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM25AB3EWG3 89 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM25CB3EWG5 89 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 FAM25GB3EWG6 89 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 TISP43B9A030 160 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 TRAFD1O14545 582 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 GUCY1B2O75343 617 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 RPA1P27694 616 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 NSFP46459 744 aaKnown RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 NT5C2P49902 561 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 IL17AQ16552 155 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 CTC1Q2NKJ3 1217 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 GPR107Q5VW38 600 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 SCARA3Q6AZY7 606 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ZNF746Q6NUN9 644 aaPredicted RBP6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 METTL7BQ6UX53 244 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 SCARA5Q6ZMJ2 495 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 ZBTB49Q6ZSB9 765 aa6.97□□□□□ -1.29
TGFBR3-209ENST00000532540 RAPH1Q70E73 1250 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms