RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	MYOF	Q9NZM1	2061 aa		25.16	■■□□□ 1.62
CNOT7-204	ENST00000518885	EP300	Q09472	2414 aa	Predicted RBP	25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	ACSL4	O60488	711 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	HSF2BP	O75031	334 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	ADAM23	O75077	832 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	GBP1	P32455	592 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	CLCN1	P35523	988 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	KCNMA1	Q12791	1236 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	STARD3	Q14849	445 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	EGFLAM	Q63HQ2	1017 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	C11orf57	Q6ZUT1	292 aa	Predicted RBP	25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	MDGA1	Q8NFP4	955 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	TPSD1	Q9BZJ3	242 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	CYTH4	Q9UIA0	394 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	NAALADL1	Q9UQQ1	740 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	FHOD1	Q9Y613	1164 aa		25.15	■■□□□ 1.62
CNOT7-204	ENST00000518885	PRRT4	C9JH25	899 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	TSPAN3	O60637	253 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	SLC2A3	P11169	496 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	CHRM1	P11229	460 aa	Predicted RBP	25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	ID4	P47928	161 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	CDK17	Q00537	523 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	SPEM2	Q0P670	501 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	KBTBD6	Q86V97	674 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	WFIKKN2	Q8TEU8	576 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	HMGB4	Q8WW32	186 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	TMEM51	Q9NW97	253 aa		25.14	■■□□□ 1.62
CNOT7-204	ENST00000518885	ATG2B	Q96BY7	2078 aa		25.14	■■□□□ 1.61
CNOT7-204	ENST00000518885	EPN2	O95208	641 aa		25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	LSM8	O95777	96 aa	Known RBP	25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	FYN	P06241	537 aa		25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	CYP11B1	P15538	503 aa		25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	HOXC13	P31276	330 aa		25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	CSRP2	Q16527	193 aa		25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	PLK5	Q496M5	336 aa		25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	HJURP	Q8NCD3	748 aa	Predicted RBP	25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	C1orf131	Q8NDD1	294 aa	Known RBP	25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	PIWIL1	Q96J94	861 aa	Known RBP	25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	PCMTD1	Q96MG8	357 aa	Predicted RBP	25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	CPXM1	Q96SM3	734 aa		25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	GABRG3	Q99928	467 aa		25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	NAA15	Q9BXJ9	866 aa	Known RBP	25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	FAM204A	Q9H8W3	233 aa		25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885	AJAP1	Q9UKB5	411 aa	Predicted RBP	25.13	■■□□□ 1.61
CNOT7-204	ENST00000518885		F8VZ95	297 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	MAP3K13	O43283	966 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	HOXD9	P28356	352 aa	Predicted RBP	25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	TYRO3	Q06418	890 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	DCAF6	Q58WW2	860 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	OR6B2	Q6IFH4	312 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	TAC4	Q86UU9	113 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	ZNF677	Q86XU0	584 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	WDTC1	Q8N5D0	677 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	FCRL2	Q96LA5	508 aa	Predicted RBP	25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	CIPC	Q9C0C6	399 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	ZDHHC4	Q9NPG8	344 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	SEMA4G	Q9NTN9	838 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	ELOVL2	Q9NXB9	296 aa		25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	LIMA1	Q9UHB6	759 aa	Known RBP	25.12	■■□□□ 1.61
CNOT7-204	ENST00000518885	ZNF217	O75362	1048 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	TRUB2	O95900	331 aa	Known RBP	25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	GEN1	Q17RS7	908 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	DPY19L2P1	Q6NXN4	242 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	ATP6V0D2	Q8N8Y2	350 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	OLIG1	Q8TAK6	271 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	SLC39A13	Q96H72	371 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	BTN2A3P	Q96KV6	586 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	SPAG5	Q96R06	1193 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	DUSP15	Q9H1R2	295 aa	Predicted RBP	25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	RRN3	Q9NYV6	651 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	TJP2	Q9UDY2	1190 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	PLA2G4C	Q9UP65	541 aa		25.11	■■□□□ 1.61
CNOT7-204	ENST00000518885	ANTXRL	A6NF34	631 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	SMTNL1	A8MU46	457 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	SYNCRIP	O60506	623 aa	Known RBP	25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	PNMA6A	P0CW24	399 aa	Predicted RBP	25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	PTMS	P20962	102 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	ABCB4	P21439	1286 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	WAS	P42768	502 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	COPB1	P53618	953 aa	Known RBP	25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	PIK3R6	Q5UE93	754 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	SYPL2	Q5VXT5	272 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	AHI1	Q8N157	1196 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	C12orf50	Q8NA57	414 aa	Predicted RBP	25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	NEK11	Q8NG66	645 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	ADAM32	Q8TC27	787 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	RNF34	Q969K3	372 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	SLC2A13	Q96QE2	648 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	FAM207A	Q9NSI2	230 aa	Predicted RBP	25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	CACNA2D2	Q9NY47	1150 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	THAP10	Q9P2Z0	257 aa	Predicted RBP	25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	STON1	Q9Y6Q2	735 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	GPR179	Q6PRD1	2367 aa		25.1	■■□□□ 1.61
CNOT7-204	ENST00000518885	LGALS16	A8MUM7	142 aa		25.09	■■□□□ 1.61
CNOT7-204	ENST00000518885	TBL1X	O60907	577 aa		25.09	■■□□□ 1.61
CNOT7-204	ENST00000518885	MOCS2	O96007	188 aa	Predicted RBP	25.09	■■□□□ 1.61
CNOT7-204	ENST00000518885	CCR1	P32246	355 aa		25.09	■■□□□ 1.61
CNOT7-204	ENST00000518885	CDH5	P33151	784 aa	Predicted RBP	25.09	■■□□□ 1.61
CNOT7-204	ENST00000518885	P2RY2	P41231	377 aa		25.09	■■□□□ 1.61

Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms