RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 FYB2Q5VWT5 728 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 GRAMD4Q6IC98 578 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 PHTF2Q8N3S3 785 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 SLC30A5Q8TAD4 765 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 DDI1Q8WTU0 396 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 NPY6RQ99463 290 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 C11orf70Q9BRQ4 267 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 SYT11Q9BT88 431 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 HAUS4Q9H6D7 363 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 PRMT8Q9NR22 394 aaPredicted RBP12.89□□□□□ -0.35
COPB2-212ENST00000514508 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
COPB2-212ENST00000514508 DDIT4Q9NX09 232 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 PLK2Q9NYY3 685 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 ADAM22Q9P0K1 906 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 SLC12A6Q9UHW9 1150 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 CAPN11Q9UMQ6 739 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.89□□□□□ -0.35
COPB2-212ENST00000514508 CACNA1HO95180 2353 aa12.89□□□□□ -0.35
COPB2-212ENST00000514508 FANCMQ8IYD8 2048 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 FAM170AA1A519 330 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 TBC1D3BA6NDS4 549 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 GOLGA8SH3BPF8 625 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 M0QYT0 321 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 GFRA2O00451 464 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 PAPSS2O95340 614 aaPredicted RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 CCR1P32246 355 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 DGKGP49619 791 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 GSCP56915 257 aaPredicted RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 PITX1P78337 314 aaPredicted RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 MRPS21P82921 87 aaKnown RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 ZBED6P86452 979 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 KDSRQ06136 332 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 KLHL30Q0D2K2 578 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 PTP4A2Q12974 167 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 ZC3H12AQ5D1E8 599 aaKnown RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 MAML2Q8IZL2 1156 aaPredicted RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 ATP6V0D2Q8N8Y2 350 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 TERB1Q8NA31 727 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 KCNV2Q8TDN2 545 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 SYN2Q92777 582 aaPredicted RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 ATOH1Q92858 354 aaPredicted RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 BHMTQ93088 406 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 NT5C3BQ969T7 300 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 ACDQ96AP0 544 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 TMA16Q96EY4 203 aaKnown RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 BTN2A3PQ96KV6 586 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 TMEM59LQ9UK28 342 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 FBXO10Q9UK96 956 aa12.88□□□□□ -0.35
COPB2-212ENST00000514508 LUC7L2Q9Y383 392 aaKnown RBP12.88□□□□□ -0.35
COPB2-212ENST00000514508 SYNJ2BP-COX16A0A087WUM0 186 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 TYW5A2RUC4 315 aaKnown RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 KCNU1A8MYU2 1149 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 TSPAN3O60637 253 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 MOCS2O96007 188 aaPredicted RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 F9P00740 461 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 CISD3P0C7P0 127 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 SP9P0CG40 484 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 ABCB4P21439 1286 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 SLC6A4P31645 630 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 SULT1E1P49888 294 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 SATB1Q01826 763 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 CSTF1Q05048 431 aaKnown RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 MESP2Q0VG99 397 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 NME3Q13232 169 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 SLC25A52Q3SY17 297 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 HSF5Q4G112 596 aaPredicted RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 FAM133BQ5BKY9 247 aaKnown RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 MPP7Q5T2T1 576 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 PIK3R6Q5UE93 754 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 E4F1Q66K89 784 aaPredicted RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 NADSYN1Q6IA69 706 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 ACAD10Q6JQN1 1059 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 SND1Q7KZF4 910 aaKnown RBP eCLIP12.87□□□□□ -0.355e-6■□□□□ 9.8
COPB2-212ENST00000514508 ZNF557Q8N988 423 aaPredicted RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 C3orf20Q8ND61 904 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 RPLP0P6Q8NHW5 317 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 USP33Q8TEY7 942 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 RNF34Q969K3 372 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 PGAP3Q96FM1 320 aaPredicted RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 P2RY11Q96G91 374 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 VCPIP1Q96JH7 1222 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 FAM126AQ9BYI3 521 aaPredicted RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 SLC2A11Q9BYW1 496 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 METTL5Q9NRN9 209 aaKnown RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 COX16Q9P0S2 106 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 SLC27A6Q9Y2P4 619 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 STARD13Q9Y3M8 1113 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 PAXBP1Q9Y5B6 917 aa12.87□□□□□ -0.35
COPB2-212ENST00000514508 BZW2Q9Y6E2 419 aaKnown RBP12.87□□□□□ -0.35
COPB2-212ENST00000514508 GOLGA6L7A0A1B0GV03 622 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 TRIM24O15164 1050 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 GYPCP04921 128 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 KRT3P12035 628 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 GZMAP12544 262 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 HOXD9P28356 352 aaPredicted RBP12.86□□□□□ -0.35
COPB2-212ENST00000514508 FLT3P36888 993 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 CXCR3P49682 368 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 SEC13P55735 322 aa12.86□□□□□ -0.35
COPB2-212ENST00000514508 NHLH1Q02575 133 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms