RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 TSHRP16473 764 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 GATMP50440 423 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 EIF4EBP2Q13542 120 aaPredicted RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 HEATR6Q6AI08 1181 aaKnown RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 VSTM1Q6UX27 236 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 TAOK1Q7L7X3 1001 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 NPAS4Q8IUM7 802 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 DQX1Q8TE96 717 aaKnown RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 TFB1MQ8WVM0 346 aaKnown RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 WDR83Q9BRX9 315 aaKnown RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 MRPL9Q9BYD2 267 aaKnown RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 RNF208Q9H0X6 261 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 PPCSQ9HAB8 311 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 ABCC13Q9NSE7 274 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 MARCH5Q9NX47 278 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 CLUHO75153 1309 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 FAM72CH0Y354 149 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 BANF1O75531 89 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 FGFR3P22607 806 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 GPX6P59796 221 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 YWHAGP61981 247 aaKnown RBP eCLIP15.45■□□□□ 0.06
VCAN-211ENST00000513984 PRKD1Q15139 912 aaPredicted RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 FAM72AQ5TYM5 149 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 FAM72DQ6L9T8 149 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 FAM72BQ86X60 149 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 TDRPQ86YL5 185 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 ATP11CQ8NB49 1132 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 CCDC110Q8TBZ0 833 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 PYROXD1Q8WU10 500 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 WDCPQ9H6R7 721 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 ABI2Q9NYB9 513 aaPredicted RBP15.45■□□□□ 0.06
VCAN-211ENST00000513984 CTNNAL1Q9UBT7 734 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 RAD54BQ9Y620 910 aa15.45■□□□□ 0.06
VCAN-211ENST00000513984 LTBP2Q14767 1821 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 EXOC1LA0A1B0GW35 172 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 OR6C75A6NL08 312 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 MYCP01106 439 aaPredicted RBP15.44■□□□□ 0.06
VCAN-211ENST00000513984 VAV1P15498 845 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 MAGEA11P43364 429 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 SLC11A1P49279 550 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 GLUD2P49448 558 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 TPI1P60174 286 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 PDK1Q15118 436 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 ZSCAN26Q16670 478 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 HP1BP3Q5SSJ5 553 aaPredicted RBP15.44■□□□□ 0.06
VCAN-211ENST00000513984 FAM171A1Q5VUB5 890 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 ZNF280DQ6N043 979 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 EXOC3L1Q86VI1 746 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 ANKMY2Q8IV38 441 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 LRRN4Q8WUT4 740 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 HTR3CQ8WXA8 447 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 SCLYQ96I15 445 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 C8orf48Q96LL4 319 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 TMEM175Q9BSA9 504 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 GPR62Q9BZJ7 368 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 HIPK3Q9H422 1215 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 VPS37BQ9H9H4 285 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 ETNK1Q9HBU6 452 aa15.44■□□□□ 0.06
VCAN-211ENST00000513984 PPP1R12AO14974 1030 aaPredicted RBP15.43■□□□□ 0.06
VCAN-211ENST00000513984 TRIM66O15016 1216 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 IRAK2O43187 625 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 ZNF189O75820 626 aaPredicted RBP15.43■□□□□ 0.06
VCAN-211ENST00000513984 ALDH2P05091 517 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 ERCC2P18074 760 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 GCAP28676 217 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 RASA2Q15283 850 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 CTXN3Q4LDR2 81 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 CCDC38Q502W7 563 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 SLC39A5Q6ZMH5 540 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 VPS52Q8N1B4 723 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 MCUQ8NE86 351 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 FBXO36Q8NEA4 188 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 ARHGEF2Q92974 986 aaKnown RBP15.43■□□□□ 0.06
VCAN-211ENST00000513984 CENPTQ96BT3 561 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 EPAS1Q99814 870 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 TKTL2Q9H0I9 626 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 EPN3Q9H201 632 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 SMOC2Q9H3U7 446 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 FETUBQ9UGM5 382 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 PCDHB5Q9Y5E4 795 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 DOCK4Q8N1I0 1966 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 A0A0A0MRY4 1105 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 TPSB2P20231 275 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 CYP2C18P33260 490 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 PHBP35232 272 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 MNX1P50219 401 aaPredicted RBP15.43■□□□□ 0.06
VCAN-211ENST00000513984 FAAP100Q0VG06 881 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 ELAVL2Q12926 359 aaKnown RBP15.43■□□□□ 0.06
VCAN-211ENST00000513984 TPSAB1Q15661 275 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 BBS9Q3SYG4 887 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 BTBD8Q5XKL5 378 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 FUT10Q6P4F1 479 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 PDZD4Q76G19 769 aaPredicted RBP15.43■□□□□ 0.06
VCAN-211ENST00000513984 SCD5Q86SK9 330 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 SCN4BQ8IWT1 228 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 CCDC33Q8N5R6 958 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 SPATA13Q96N96 652 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 TOX2Q96NM4 488 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 LGMNQ99538 433 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms