RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 USP51Q70EK9 711 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 GPR149Q86SP6 731 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 ARHGEF19Q8IW93 802 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 NGDNQ8NEJ9 315 aaKnown RBP6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 CREB3L4Q8TEY5 395 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 R3HDM4Q96D70 268 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 MASTLQ96GX5 879 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 APOPT1Q96IL0 206 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PBKQ96KB5 322 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PRR25Q96S07 402 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 RMI1Q9H9A7 625 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PPP1R14DQ9NXH3 145 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 SLC25A10Q9UBX3 287 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 CNOT7Q9UIV1 285 aaKnown RBP6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 CNOT11Q9UKZ1 510 aaKnown RBP6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 TRPC5Q9UL62 973 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 TESMINQ9Y4I5 508 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 PCDHA10Q9Y5I2 948 aa6.04□□□□□ -1.44
HMGB1P47-201ENST00000511281 GAGE10A6NGK3 116 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 FAM90A7PA6NKC0 464 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 FAM90A22PA8MWA6 464 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 FAM90A12PA8MX19 464 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 FAM90A23PA8MXZ1 464 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 SPTLC2O15270 562 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 FESP07332 822 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 RHOP08100 348 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 DLDP09622 509 aaKnown RBP6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 ALADP13716 330 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 CPA1P15085 419 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 CREB1P16220 341 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 GRK5P34947 590 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 IGHMBP2P38935 993 aaKnown RBP6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 CCR9P51686 369 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 CLCN2P51788 898 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 TAS2R50P59544 299 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 SLC25A3Q00325 362 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 DEUP1Q05D60 604 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 PTP4A2Q12974 167 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 FZD5Q13467 585 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 BFSP2Q13515 415 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 BMPR2Q13873 1038 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 KRT32Q14532 448 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 PRKD1Q15139 912 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 TBCCQ15814 346 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 KRTAP19-4Q3LI73 84 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 ANKRD40Q6AI12 368 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 ITPRIPL1Q6GPH6 555 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 ZNF276Q8N554 614 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 NFKBIDQ8NI38 313 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 RFKQ969G6 155 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 SH3KBP1Q96B97 665 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 PTCD3Q96EY7 689 aaKnown RBP6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 RBM17Q96I25 401 aaKnown RBP6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 BARD1Q99728 777 aaKnown RBP6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 STN1Q9H668 368 aaKnown RBP6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 SAP30LQ9HAJ7 183 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 TBCCD1Q9NVR7 557 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 TBC1D14Q9P2M4 693 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 RAB21Q9UL25 225 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 ASAP1Q9ULH1 1129 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 FZD1Q9UP38 647 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 SLC12A4Q9UP95 1085 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 TCAF1Q9Y4C2 921 aa6.03□□□□□ -1.44
HMGB1P47-201ENST00000511281 TBC1D3DA0A087WVF3 549 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3IA0A087WXS9 549 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3EA0A087X179 549 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3KA0A087X1G2 549 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 FSD2A1L4K1 749 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3BA6NDS4 549 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3FA6NER0 549 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 AGAP5A6NIR3 686 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 VWC2LB2RUY7 222 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3LB9A6J9 549 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 FIBPO43427 364 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 GFPT2O94808 682 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 MBPP02686 304 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3HP0C7X1 549 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 EGR2P11161 476 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 ITPKBP27987 946 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 DUSP1P28562 367 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 CTGFP29279 349 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 GUCY1B3Q02153 619 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 EIF2B5Q13144 721 aaKnown RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TOMM20Q15388 145 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 FAM205BPQ63HN1 556 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 DENND2CQ68D51 928 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3GQ6DHY5 549 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3CQ6IPX1 549 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 WDR93Q6P2C0 686 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 RHOUQ7L0Q8 258 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 R3HCC1LQ7Z5L2 792 aaKnown RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 TBC1D3Q8IZP1 549 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 NGEFQ8N5V2 710 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 BEND2Q8NDZ0 799 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 ARRDC3Q96B67 414 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 LENG9Q96B70 501 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 DPCDQ9BVM2 203 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 RNF26Q9BY78 433 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 PDE11AQ9HCR9 933 aa6.02□□□□□ -1.45
HMGB1P47-201ENST00000511281 PARD6AQ9NPB6 346 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms