RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 VASPP50552 380 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 TKTL1P51854 596 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 COPAP53621 1224 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 YWHAGP61981 247 aaKnown RBP eCLIP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 COG7P83436 770 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 FOXK1P85037 733 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 BNC1Q01954 994 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 PDE4CQ08493 712 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 LMAN2Q12907 356 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 FOXC1Q12948 553 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 TRIP4Q15650 581 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 DUOXA1Q1HG43 343 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 GOLGA7BQ2TAP0 167 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 PREPLQ4J6C6 727 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 COBLL1Q53SF7 1204 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 ANKRD40Q6AI12 368 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 UNQ6494/PRO21346Q6UXR6 183 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 SLC36A4Q6YBV0 504 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 METTL3Q86U44 580 aaKnown RBP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 DENND1CQ8IV53 801 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 TRIML1Q8N9V2 468 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 KDF1Q8NAX2 398 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 C1orf216Q8TAB5 229 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 SORCS1Q8WY21 1168 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 TFAP2BQ92481 460 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 SLC35C1Q96A29 364 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 FAXDC2Q96IV6 333 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 HSPA12BQ96MM6 686 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 SCNM1Q9BWG6 230 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 NUSAP1Q9BXS6 441 aaKnown RBP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 ULBP1Q9BZM6 244 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 SCAND2PQ9GZW5 306 aaPredicted RBP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 ITM2CQ9NQX7 267 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 MARCH2Q9P0N8 246 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 USP36Q9P275 1121 aaKnown RBP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 RASAL2Q9UJF2 1139 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 STOML2Q9UJZ1 356 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 LSM7Q9UK45 103 aaKnown RBP6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 SLCO1B1Q9Y6L6 691 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 BPTFQ12830 3046 aa6.74□□□□□ -1.33
HMGN1P16-201ENST00000508308 SLC12A8A0AV02 714 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 TRIM49BA6NDI0 452 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 O00370 1275 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 XPO1O14980 1071 aaKnown RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 HYAL3O43820 417 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 ZNF217O75362 1048 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 IGLV3-19P01714 112 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 RALAP11233 206 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 BMP6P22004 513 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 PRKCHP24723 683 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 HOXD9P28356 352 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 CD6P30203 668 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 HLA-FP30511 346 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 CHKAP35790 457 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 TPMTP51580 245 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 SGSHP51688 502 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 GFPT1Q06210 699 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 GOLGA8FQ08AF8 430 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 GOLGA8DPQ0D2H9 430 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 CUL2Q13617 745 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 ZNF234Q14588 700 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 ZNF658Q5TYW1 1059 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 SDE2Q6IQ49 451 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 NUDT18Q6ZVK8 323 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 KIAA0907Q7Z7F0 614 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 ADIPOR2Q86V24 386 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 PLPP6Q8IY26 295 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 CPXM2Q8N436 756 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 TTC39CQ8N584 583 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 MINDY1Q8N5J2 469 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 LMO3Q8TAP4 145 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 CEP76Q8TAP6 659 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 UBA3Q8TBC4 463 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 DNASE2BQ8WZ79 361 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 EDEM1Q92611 657 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 KAT5Q92993 513 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 TOE1Q96GM8 510 aaKnown RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 LMLNQ96KR4 655 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 CAMK1GQ96NX5 476 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 GTPBP2Q9BX10 602 aaKnown RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 MFRPQ9BY79 579 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 ADAM33Q9BZ11 813 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 DCLK3Q9C098 648 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 FAM124BQ9H5Z6 455 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 PRDM16Q9HAZ2 1276 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 DNAAF2Q9NVR5 837 aaKnown RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 ELOVL2Q9NXB9 296 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 WSB2Q9NYS7 404 aaPredicted RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 KLK13Q9UKR3 277 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 TSPAN16Q9UKR8 245 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 ZMIZ1Q9ULJ6 1067 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 ZNF510Q9Y2H8 683 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 PLXNB3Q9ULL4 1909 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 APC2O95996 2303 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 BAHCC1Q9P281 2608 aa6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 FASNP49327 2511 aaKnown RBP6.73□□□□□ -1.33
HMGN1P16-201ENST00000508308 GOLGA6L7A0A1B0GV03 622 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
HMGN1P16-201ENST00000508308 CETN3O15182 167 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms