RNA–Protein interactions for RNA: ENST00000504315.1

HOXC6-203, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-203ENST00000504315 LHX5Q9H2C1 402 aa14.25□□□□□ -0.13
HOXC6-203ENST00000504315 ARRDC1-AS1Q9H2J1 176 aa14.25□□□□□ -0.13
HOXC6-203ENST00000504315 ST7Q9NRC1 585 aa14.25□□□□□ -0.13
HOXC6-203ENST00000504315 SAMSN1Q9NSI8 373 aaKnown RBP14.25□□□□□ -0.13
HOXC6-203ENST00000504315 DNAJC12Q9UKB3 198 aa14.25□□□□□ -0.13
HOXC6-203ENST00000504315 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.25□□□□□ -0.13
HOXC6-203ENST00000504315 CHD5Q8TDI0 1954 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 TCRBV21S2A2A0A5A6 115 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 IGLV3-25P01717 112 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 NCAM1P13591 858 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 BCKDHBP21953 392 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 CLCN1P35523 988 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 MPLP40238 635 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 EIF4EBP2Q13542 120 aaPredicted RBP14.24□□□□□ -0.13
HOXC6-203ENST00000504315 FAM133BQ5BKY9 247 aaKnown RBP14.24□□□□□ -0.13
HOXC6-203ENST00000504315 TCP11X2Q5H9J9 407 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 MPP7Q5T2T1 576 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 KIAA0907Q7Z7F0 614 aaPredicted RBP14.24□□□□□ -0.13
HOXC6-203ENST00000504315 FAM71AQ8IYT1 594 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 CHPFQ8IZ52 775 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 WDTC1Q8N5D0 677 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 NETO1Q8TDF5 533 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 IPO4Q8TEX9 1081 aaKnown RBP14.24□□□□□ -0.13
HOXC6-203ENST00000504315 DDI1Q8WTU0 396 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 HMGB4Q8WW32 186 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 FCRL2Q96LA5 508 aaPredicted RBP14.24□□□□□ -0.13
HOXC6-203ENST00000504315 SERPINB11Q96P15 392 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 THAP10Q9P2Z0 257 aaPredicted RBP14.24□□□□□ -0.13
HOXC6-203ENST00000504315 NAALADL1Q9UQQ1 740 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 TLR6Q9Y2C9 796 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 NFE2L3Q9Y4A8 694 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 LAMA1P25391 3075 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 KNL1Q8NG31 2342 aa14.24□□□□□ -0.13
HOXC6-203ENST00000504315 TP53BP1Q12888 1972 aaPredicted RBP14.23□□□□□ -0.13
HOXC6-203ENST00000504315 PCDH15Q96QU1 1955 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 BCLAF3A2AJT9 711 aaKnown RBP14.23□□□□□ -0.13
HOXC6-203ENST00000504315 FOXN3O00409 490 aaPredicted RBP14.23□□□□□ -0.13
HOXC6-203ENST00000504315 IRAK2O43187 625 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 ACSL4O60488 711 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 GLI1P08151 1106 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 HLA-FP30511 346 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 TBX4P57082 545 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 PTK2Q05397 1052 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 E2F5Q15329 346 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 HSP90AA4PQ58FG1 418 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 SPDYCQ5MJ68 293 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 PIK3R6Q5UE93 754 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 KLHDC7AQ5VTJ3 777 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 CDKAL1Q5VV42 579 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 TMEM215Q68D42 235 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 SDE2Q6IQ49 451 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 KIAA1211LQ6NV74 962 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 PIAS4Q8N2W9 510 aaPredicted RBP14.23□□□□□ -0.13
HOXC6-203ENST00000504315 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.23□□□□□ -0.13
HOXC6-203ENST00000504315 UCMAQ8WVF2 138 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 FAM149B1Q96BN6 582 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 TMA16Q96EY4 203 aaKnown RBP14.23□□□□□ -0.13
HOXC6-203ENST00000504315 SPACA7Q96KW9 195 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 RTKNQ9BST9 563 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 NAA15Q9BXJ9 866 aaKnown RBP14.23□□□□□ -0.13
HOXC6-203ENST00000504315 POPDC2Q9HBU9 364 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 ASNSD1Q9NWL6 643 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 CACNA2D2Q9NY47 1150 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 BCCIPQ9P287 314 aaKnown RBP eCLIP14.23□□□□□ -0.13
HOXC6-203ENST00000504315 TJP2Q9UDY2 1190 aa14.23□□□□□ -0.13
HOXC6-203ENST00000504315 CDV3Q9UKY7 258 aaKnown RBP14.23□□□□□ -0.13
HOXC6-203ENST00000504315 GOLGA6L22H0YM25 854 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 SLC30A4O14863 429 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 TIMM44O43615 452 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 C7P10643 843 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 NDUFV2P19404 249 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 SLC6A4P31645 630 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 GBP1P32455 592 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 USP8P40818 1118 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 IL12RB1P42701 662 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 WASP42768 502 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 SLC11A2P49281 568 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 SGSHP51688 502 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 LIMK1P53667 647 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 ATXN1P54253 815 aaKnown RBP14.22□□□□□ -0.13
HOXC6-203ENST00000504315 YWHAZP63104 245 aaKnown RBP14.22□□□□□ -0.13
HOXC6-203ENST00000504315 BYSLQ13895 437 aaKnown RBP14.22□□□□□ -0.13
HOXC6-203ENST00000504315 SYPL2Q5VXT5 272 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 NADSYN1Q6IA69 706 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 TAC4Q86UU9 113 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 SLC47A2Q86VL8 602 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 WFIKKN2Q8TEU8 576 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 RLN3Q8WXF3 142 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 CPXM1Q96SM3 734 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 PLCB1Q9NQ66 1216 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 VPS45Q9NRW7 570 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 ELOVL2Q9NXB9 296 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 CALCOCO1Q9P1Z2 691 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 MBD1Q9UIS9 605 aaPredicted RBP14.22□□□□□ -0.13
HOXC6-203ENST00000504315 INVSQ9Y283 1065 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 FHOD1Q9Y613 1164 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 STON1Q9Y6Q2 735 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 NCOR2Q9Y618 2525 aa14.22□□□□□ -0.13
HOXC6-203ENST00000504315 CABIN1Q9Y6J0 2220 aa14.21□□□□□ -0.13
HOXC6-203ENST00000504315 PNMA6AP0CW24 399 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms