RNA–Protein interactions for RNA: ENST00000502801.1

CCDC149-203, Transcript of coiled-coil domain containing 149, humanhuman

TSL 1 (best) BASIC

Gene CCDC149, Length 1,079 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-203ENST00000502801 CEP83Q9Y592 693 aa27.16■■□□□ 1.94
CCDC149-203ENST00000502801 CEP250Q9BV73 2442 aa27.16■■□□□ 1.94
CCDC149-203ENST00000502801 ACSL4O60488 711 aa27.15■■□□□ 1.94
CCDC149-203ENST00000502801 HOXB2P14652 356 aa27.15■■□□□ 1.94
CCDC149-203ENST00000502801 CYP11B1P15538 503 aa27.15■■□□□ 1.94
CCDC149-203ENST00000502801 HOXD9P28356 352 aaPredicted RBP27.15■■□□□ 1.94
CCDC149-203ENST00000502801 SLC11A2P49281 568 aa27.15■■□□□ 1.94
CCDC149-203ENST00000502801 COPB1P53618 953 aaKnown RBP27.15■■□□□ 1.94
CCDC149-203ENST00000502801 SPEM2Q0P670 501 aa27.15■■□□□ 1.94
CCDC149-203ENST00000502801 NNTQ13423 1086 aa27.15■■□□□ 1.94
CCDC149-203ENST00000502801 NCAPHQ15003 741 aa27.15■■□□□ 1.94
CCDC149-203ENST00000502801 USP39Q53GS9 565 aaKnown RBP27.15■■□□□ 1.94
CCDC149-203ENST00000502801 AZIN2Q96A70 460 aa27.15■■□□□ 1.94
CCDC149-203ENST00000502801 SLC39A13Q96H72 371 aa27.15■■□□□ 1.94
CCDC149-203ENST00000502801 LIMA1Q9UHB6 759 aaKnown RBP27.15■■□□□ 1.94
CCDC149-203ENST00000502801 GOLGA6L7A0A1B0GV03 622 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 TCRBV21S2A2A0A5A6 115 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 F8VZ95 297 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 FAM133BQ5BKY9 247 aaKnown RBP27.14■■□□□ 1.94
CCDC149-203ENST00000502801 SDE2Q6IQ49 451 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 RFWD3Q6PCD5 774 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 ANKRD20A12PQ8NF67 263 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 HMGB4Q8WW32 186 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 ZC3H10Q96K80 434 aaKnown RBP27.14■■□□□ 1.94
CCDC149-203ENST00000502801 PDCL3Q9H2J4 239 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 BCCIPQ9P287 314 aaKnown RBP eCLIP27.14■■□□□ 1.94
CCDC149-203ENST00000502801 USP18Q9UMW8 372 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 THADAQ6YHU6 1953 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 DMXL1Q9Y485 3027 aa27.14■■□□□ 1.94
CCDC149-203ENST00000502801 TRUB2O95900 331 aaKnown RBP27.13■■□□□ 1.93
CCDC149-203ENST00000502801 ERBB2P04626 1255 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 GLI1P08151 1106 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 ZNF18P17022 549 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 CDK11BP21127 795 aaKnown RBP27.13■■□□□ 1.93
CCDC149-203ENST00000502801 SLC6A4P31645 630 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 SGSHP51688 502 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 PLK5Q496M5 336 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 PTPN20Q4JDL3 420 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 DCAF6Q58WW2 860 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 EFHC1Q5JVL4 640 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 PIK3R6Q5UE93 754 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 NADSYN1Q6IA69 706 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 OR6B2Q6IFH4 312 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 CAVIN1Q6NZI2 390 aaKnown RBP27.13■■□□□ 1.93
CCDC149-203ENST00000502801 FAM183BPQ6ZVS7 135 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 ANKS1BQ7Z6G8 1248 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 DUSP15Q9H1R2 295 aaPredicted RBP27.13■■□□□ 1.93
CCDC149-203ENST00000502801 HSD3B7Q9H2F3 369 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 SYNCQ9H7C4 482 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 FAM207AQ9NSI2 230 aaPredicted RBP27.13■■□□□ 1.93
CCDC149-203ENST00000502801 CACNA2D2Q9NY47 1150 aa27.13■■□□□ 1.93
CCDC149-203ENST00000502801 A0A1W2PQF6 199 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 SNX16P57768 344 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 POLR2FP61218 127 aaKnown RBP27.12■■□□□ 1.93
CCDC149-203ENST00000502801 PITX1P78337 314 aaPredicted RBP27.12■■□□□ 1.93
CCDC149-203ENST00000502801 TAF3Q5VWG9 929 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 OLFML1Q6UWY5 402 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 DEFB106AQ8N104 65 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 PGBD3Q8N328 593 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 AOPEPQ8N6M6 819 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 TMEM35BQ8NCS4 154 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 OLIG1Q8TAK6 271 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 IPO4Q8TEX9 1081 aaKnown RBP27.12■■□□□ 1.93
CCDC149-203ENST00000502801 DDX1Q92499 740 aaKnown RBP27.12■■□□□ 1.93
CCDC149-203ENST00000502801 LOXL4Q96JB6 756 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 GABRG3Q99928 467 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 ASNSD1Q9NWL6 643 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 SIK3Q9Y2K2 1263 aa27.12■■□□□ 1.93
CCDC149-203ENST00000502801 LGALS16A8MUM7 142 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 WASH3PC4AMC7 463 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 EPHB6O15197 1021 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 IRAK2O43187 625 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 HSF2BPO75031 334 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 LRP3O75074 770 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 GRAP2O75791 330 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 IGLV3-25P01717 112 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 GBP1P32455 592 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 CDH5P33151 784 aaPredicted RBP27.11■■□□□ 1.93
CCDC149-203ENST00000502801 SYCP1Q15431 976 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 ANO6Q4KMQ2 910 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 ZC3H12AQ5D1E8 599 aaKnown RBP27.11■■□□□ 1.93
CCDC149-203ENST00000502801 NOP9Q86U38 636 aaKnown RBP27.11■■□□□ 1.93
CCDC149-203ENST00000502801 ERLEC1Q96DZ1 483 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 SLC2A13Q96QE2 648 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 DDX50Q9BQ39 737 aaKnown RBP27.11■■□□□ 1.93
CCDC149-203ENST00000502801 IRX2Q9BZI1 471 aaPredicted RBP27.11■■□□□ 1.93
CCDC149-203ENST00000502801 NLRC4Q9NPP4 1024 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 ELOVL2Q9NXB9 296 aa27.11■■□□□ 1.93
CCDC149-203ENST00000502801 LRRC10BA6NIK2 292 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 TBL1XO60907 577 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 MOCS2O96007 188 aaPredicted RBP27.1■■□□□ 1.93
CCDC149-203ENST00000502801 GABRG2P18507 467 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 HLA-FP30511 346 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 SLC6A3Q01959 620 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 ELF2Q15723 593 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 TMEM215Q68D42 235 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 KIAA1211LQ6NV74 962 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 UCMAQ8WVF2 138 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 RLN3Q8WXF3 142 aa27.1■■□□□ 1.93
CCDC149-203ENST00000502801 NAT10Q9H0A0 1025 aaKnown RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms