RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TBL1XO60907 577 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 DHPSP49366 369 aaPredicted RBP18.37■□□□□ 0.53
COL6A1-204ENST00000486023 SGSHP51688 502 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 YWHAZP63104 245 aaKnown RBP18.37■□□□□ 0.53
COL6A1-204ENST00000486023 CSRP2Q16527 193 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 NUGGCQ68CJ6 796 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 KIAA1211LQ6NV74 962 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 PRR23CQ6ZRP0 262 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 ANKS1BQ7Z6G8 1248 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 TMEM110Q86TL2 294 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 TAC4Q86UU9 113 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 C12orf50Q8NA57 414 aaPredicted RBP18.37■□□□□ 0.53
COL6A1-204ENST00000486023 IPO4Q8TEX9 1081 aaKnown RBP18.37■□□□□ 0.53
COL6A1-204ENST00000486023 UCMAQ8WVF2 138 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 ZC3H10Q96K80 434 aaKnown RBP18.37■□□□□ 0.53
COL6A1-204ENST00000486023 PCMTD1Q96MG8 357 aaPredicted RBP18.37■□□□□ 0.53
COL6A1-204ENST00000486023 SERPINB11Q96P15 392 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 NOX5Q96PH1 765 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 SLC6A17Q9H1V8 727 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 ANO10Q9NW15 660 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 FBXO10Q9UK96 956 aa18.37■□□□□ 0.53
COL6A1-204ENST00000486023 CDV3Q9UKY7 258 aaKnown RBP18.37■□□□□ 0.53
COL6A1-204ENST00000486023 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 GDF9O60383 454 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 ACSL4O60488 711 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 GABRG2P18507 467 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 CDK11BP21127 795 aaKnown RBP18.36■□□□□ 0.53
COL6A1-204ENST00000486023 RPL34P49207 117 aaKnown RBP18.36■□□□□ 0.53
COL6A1-204ENST00000486023 KLK7P49862 253 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 KRT31Q15323 416 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 STX1AQ16623 288 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 AASDHQ4L235 1098 aaPredicted RBP18.36■□□□□ 0.53
COL6A1-204ENST00000486023 DCAF6Q58WW2 860 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 TMEFF1Q8IYR6 380 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 RNF34Q969K3 372 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 PIWIL1Q96J94 861 aaKnown RBP18.36■□□□□ 0.53
COL6A1-204ENST00000486023 SPACA7Q96KW9 195 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 CPXM1Q96SM3 734 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 POPDC2Q9HBU9 364 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 SLC27A6Q9Y2P4 619 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 CEP83Q9Y592 693 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 STON1Q9Y6Q2 735 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 DMXL1Q9Y485 3027 aa18.36■□□□□ 0.53
COL6A1-204ENST00000486023 A0A1W2PQF6 199 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 PRR5-ARHGAP8B1AHC4 643 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 EPN2O95208 641 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 MBD3O95983 291 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 HOXD9P28356 352 aaPredicted RBP18.35■□□□□ 0.53
COL6A1-204ENST00000486023 SLC6A4P31645 630 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 MPLP40238 635 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 BPIFB4P59827 614 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 ARHGAP8P85298 464 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 STARD3Q14849 445 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 ZC3H12AQ5D1E8 599 aaKnown RBP18.35■□□□□ 0.53
COL6A1-204ENST00000486023 FKBP15Q5T1M5 1219 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 CCDC183Q5T5S1 534 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 KIAA1324Q6UXG2 1013 aaKnown RBP18.35■□□□□ 0.53
COL6A1-204ENST00000486023 RBM43Q6ZSC3 357 aaKnown RBP18.35■□□□□ 0.53
COL6A1-204ENST00000486023 DGLUCYQ7Z3D6 616 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 FAM217AQ8IXS0 508 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 DEFB106AQ8N104 65 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 CARNMT1Q8N4J0 409 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 LOXL4Q96JB6 756 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 TRIM62Q9BVG3 475 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 SLC2A11Q9BYW1 496 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 FAM204AQ9H8W3 233 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 ABCB8Q9NUT2 735 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 ELOVL2Q9NXB9 296 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 CALCOCO1Q9P1Z2 691 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 TLR6Q9Y2C9 796 aa18.35■□□□□ 0.53
COL6A1-204ENST00000486023 SYNCRIPO60506 623 aaKnown RBP18.34■□□□□ 0.53
COL6A1-204ENST00000486023 LRP3O75074 770 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 LATS1O95835 1130 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 TRUB2O95900 331 aaKnown RBP18.34■□□□□ 0.53
COL6A1-204ENST00000486023 IGLV3-27P01718 113 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 APOEP02649 317 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 UCHL3P15374 230 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 IL12RB1P42701 662 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 RNASE9P60153 205 aaKnown RBP18.34■□□□□ 0.53
COL6A1-204ENST00000486023 PITX1P78337 314 aaPredicted RBP18.34■□□□□ 0.53
COL6A1-204ENST00000486023 BYSLQ13895 437 aaKnown RBP18.34■□□□□ 0.53
COL6A1-204ENST00000486023 PUM1Q14671 1186 aaKnown RBP eCLIP18.34■□□□□ 0.53
COL6A1-204ENST00000486023 MEA1Q16626 185 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 EFHC1Q5JVL4 640 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 PIK3R6Q5UE93 754 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 NADSYN1Q6IA69 706 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 TCEAL6Q6IPX3 200 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 DPY19L2P1Q6NXN4 242 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 FAM183BPQ6ZVS7 135 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 CHST9Q7L1S5 443 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 CACUL1Q86Y37 369 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 FAM71AQ8IYT1 594 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 CFAP52Q8N1V2 620 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 OLIG1Q8TAK6 271 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 CYB5D2Q8WUJ1 264 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 PIGKQ92643 395 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 TCEAL3Q969E4 200 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 FCRL2Q96LA5 508 aaPredicted RBP18.34■□□□□ 0.53
COL6A1-204ENST00000486023 GABRG3Q99928 467 aa18.34■□□□□ 0.53
COL6A1-204ENST00000486023 DDX50Q9BQ39 737 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms