RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 NOP9Q86U38 636 aaKnown RBP19.48■□□□□ 0.71
HSPG2-210ENST00000481644 DCLK2Q8N568 766 aa19.48■□□□□ 0.71
HSPG2-210ENST00000481644 NEK11Q8NG66 645 aa19.48■□□□□ 0.71
HSPG2-210ENST00000481644 EPS8L1Q8TE68 723 aa19.48■□□□□ 0.71
HSPG2-210ENST00000481644 TMA16Q96EY4 203 aaKnown RBP19.48■□□□□ 0.71
HSPG2-210ENST00000481644 SPAG5Q96R06 1193 aa19.48■□□□□ 0.71
HSPG2-210ENST00000481644 SLC2A11Q9BYW1 496 aa19.48■□□□□ 0.71
HSPG2-210ENST00000481644 POLMQ9NP87 494 aaPredicted RBP19.48■□□□□ 0.71
HSPG2-210ENST00000481644 ASNSD1Q9NWL6 643 aa19.48■□□□□ 0.71
HSPG2-210ENST00000481644 GMEB2Q9UKD1 530 aa19.48■□□□□ 0.71
HSPG2-210ENST00000481644 HCN2Q9UL51 889 aa19.48■□□□□ 0.71
HSPG2-210ENST00000481644 RIF1Q5UIP0 2472 aaKnown RBP19.47■□□□□ 0.71
HSPG2-210ENST00000481644 SMTNL1A8MU46 457 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 ACSL4O60488 711 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 HSF2BPO75031 334 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 GRAP2O75791 330 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 ALDH1A2O94788 518 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 TRUB2O95900 331 aaKnown RBP19.47■□□□□ 0.71
HSPG2-210ENST00000481644 HNRNPLP14866 589 aaKnown RBP eCLIP19.47■□□□□ 0.71
HSPG2-210ENST00000481644 PTMSP20962 102 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 HOXD9P28356 352 aaPredicted RBP19.47■□□□□ 0.71
HSPG2-210ENST00000481644 NTSR1P30989 418 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 CDH5P33151 784 aaPredicted RBP19.47■□□□□ 0.71
HSPG2-210ENST00000481644 SOX5P35711 763 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 JAM2P57087 298 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 DCAF6Q58WW2 860 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 OLFML1Q6UWY5 402 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 ANKS1BQ7Z6G8 1248 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.47■□□□□ 0.71
HSPG2-210ENST00000481644 DHX40Q8IX18 779 aaKnown RBP19.47■□□□□ 0.71
HSPG2-210ENST00000481644 DDX1Q92499 740 aaKnown RBP19.47■□□□□ 0.71
HSPG2-210ENST00000481644 AZIN2Q96A70 460 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 SLC39A13Q96H72 371 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 SLC2A13Q96QE2 648 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 ERGIC2Q96RQ1 377 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 CLEC4EQ9ULY5 219 aa19.47■□□□□ 0.71
HSPG2-210ENST00000481644 OTOGLQ3ZCN5 2332 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 GOLGA6L7A0A1B0GV03 622 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 GFRA2O00451 464 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 IRAK2O43187 625 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 LSM8O95777 96 aaKnown RBP19.46■□□□□ 0.71
HSPG2-210ENST00000481644 MOCS2O96007 188 aaPredicted RBP19.46■□□□□ 0.71
HSPG2-210ENST00000481644 APOEP02649 317 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 MMEP08473 750 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 SLC6A4P31645 630 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 WASP42768 502 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 ZNF165P49910 485 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 SLC6A3Q01959 620 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 GEN1Q17RS7 908 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 FAM133BQ5BKY9 247 aaKnown RBP19.46■□□□□ 0.71
HSPG2-210ENST00000481644 SDE2Q6IQ49 451 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 RFWD3Q6PCD5 774 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 RASSF3Q86WH2 238 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 ZDHHC17Q8IUH5 632 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 CHPFQ8IZ52 775 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 DEFB106AQ8N104 65 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 MDGA1Q8NFP4 955 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 DDX50Q9BQ39 737 aaKnown RBP19.46■□□□□ 0.71
HSPG2-210ENST00000481644 FUCA2Q9BTY2 467 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 IRX2Q9BZI1 471 aaPredicted RBP19.46■□□□□ 0.71
HSPG2-210ENST00000481644 TPSD1Q9BZJ3 242 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 FAM204AQ9H8W3 233 aa19.46■□□□□ 0.71
HSPG2-210ENST00000481644 SPAG17Q6Q759 2223 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 PTPRZ1P23471 2315 aaPredicted RBP19.45■□□□□ 0.7
HSPG2-210ENST00000481644 TCRBV21S2A2A0A5A6 115 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 FAM170AA1A519 330 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 SYCE3A1L190 88 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 IGLV3-25P01717 112 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 HOXB2P14652 356 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 STAT1P42224 750 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 SGSHP51688 502 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 PITX1P78337 314 aaPredicted RBP19.45■□□□□ 0.7
HSPG2-210ENST00000481644 CDK17Q00537 523 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 ZC3H12AQ5D1E8 599 aaKnown RBP19.45■□□□□ 0.7
HSPG2-210ENST00000481644 PIK3R6Q5UE93 754 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 NADSYN1Q6IA69 706 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 SLC26A9Q7LBE3 791 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 CACNA2D4Q7Z3S7 1137 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 ERICH1Q86X53 443 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 ZNF677Q86XU0 584 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 FAM160A2Q8N612 972 aaPredicted RBP19.45■□□□□ 0.7
HSPG2-210ENST00000481644 MSANTD4Q8NCY6 345 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 UCMAQ8WVF2 138 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 ACOX2Q99424 681 aa19.45■□□□□ 0.7
HSPG2-210ENST00000481644 BCCIPQ9P287 314 aaKnown RBP eCLIP19.45■□□□□ 0.7
HSPG2-210ENST00000481644 NOCTQ9UK39 431 aaKnown RBP19.45■□□□□ 0.7
HSPG2-210ENST00000481644 SYNJ2BP-COX16A0A087WUM0 186 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 TBL1XO60907 577 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 DAB1O75553 588 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 GBP1P32455 592 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 KBTBD6Q86V97 674 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 KIAA2013Q8IYS2 634 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 ZNF397Q8NF99 534 aaPredicted RBP19.44■□□□□ 0.7
HSPG2-210ENST00000481644 SLC20A1Q8WUM9 679 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 HMGB4Q8WW32 186 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 C18orf8Q96DM3 657 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 DDIT4Q9NX09 232 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 COX16Q9P0S2 106 aa19.44■□□□□ 0.7
HSPG2-210ENST00000481644 GPR179Q6PRD1 2367 aa19.43■□□□□ 0.7
HSPG2-210ENST00000481644 TYW5A2RUC4 315 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms