RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 POU5F1Q01860 360 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 SULT2A1Q06520 285 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 SYTL3Q4VX76 610 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 USP39Q53GS9 565 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 BOLA3Q53S33 107 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 PLEKHG4Q58EX7 1191 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 INTS6LQ5JSJ4 861 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 METTL3Q86U44 580 aaKnown RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 MCOLN2Q8IZK6 566 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 SNX27Q96L92 541 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 FZD8Q9H461 694 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 FAM124BQ9H5Z6 455 aaPredicted RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 NRDE2Q9H7Z3 1164 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 ACTR5Q9H9F9 607 aaPredicted RBP6.15□□□□□ -1.42
CPS1-207ENST00000479988 TUBGCP4Q9UGJ1 667 aa6.15□□□□□ -1.42
CPS1-207ENST00000479988 GMNCA6NCL1 334 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 APOL1O14791 398 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 FANCGO15287 622 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 RAMP2O60895 175 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 DNAJC6O75061 913 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 CPP00450 1065 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 OR4Q2P0C623 313 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 PAPOLAP51003 745 aaKnown RBP6.15□□□□□ -1.43
CPS1-207ENST00000479988 RENBPP51606 427 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 GYS2P54840 703 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 POLR2LP62875 67 aaKnown RBP6.15□□□□□ -1.43
CPS1-207ENST00000479988 DEFB103AP81534 67 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 TAF10Q12962 218 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 STAT4Q14765 748 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 TMEM240Q5SV17 173 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 ACBD5Q5T8D3 534 aaPredicted RBP6.15□□□□□ -1.43
CPS1-207ENST00000479988 CENPUQ71F23 418 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 TAS2R42Q7RTR8 314 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 PID1Q7Z2X4 250 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 SDCCAG8Q86SQ7 713 aaPredicted RBP6.15□□□□□ -1.43
CPS1-207ENST00000479988 C10orf67Q8IYJ2 551 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 EXD1Q8NHP7 514 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 ZNF461Q8TAF7 563 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 OR8D1Q8WZ84 308 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 TOP1MTQ969P6 601 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 MRPL38Q96DV4 380 aaKnown RBP6.15□□□□□ -1.43
CPS1-207ENST00000479988 HSFY1Q96LI6 401 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 OSBPL8Q9BZF1 889 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 SENP1Q9P0U3 644 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 PCYOX1Q9UHG3 505 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 A0A1W2PPC1 479 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 LRRC72A6NJI9 287 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 PIGRP01833 764 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 HTR1BP28222 390 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 HSD17B3P37058 310 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 SETDB1Q15047 1291 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 EOGTQ5NDL2 527 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 FAM35AQ86V20 835 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 MYLK4Q86YV6 388 aaPredicted RBP6.15□□□□□ -1.43
CPS1-207ENST00000479988 IQCKQ8N0W5 287 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 RIBC1Q8N443 379 aaPredicted RBP6.15□□□□□ -1.43
CPS1-207ENST00000479988 SLC20A1Q8WUM9 679 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 NUDCD1Q96RS6 583 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 STRA6Q9BX79 667 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 TRIM54Q9BYV2 358 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 EPN3Q9H201 632 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 PLSCR2Q9NRY7 297 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 ABCF3Q9NUQ8 709 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 FAM8A1Q9UBU6 413 aa6.15□□□□□ -1.43
CPS1-207ENST00000479988 SBF2Q86WG5 1849 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.14□□□□□ -1.43
CPS1-207ENST00000479988 A0A1W2PRU2 124 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 KANSL1LA0AUZ9 987 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 NEDD8-MDP1E9PL57 170 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 ENDOD1O94919 500 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 IL1BP01584 269 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 ADRB2P07550 413 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 CCDC130P13994 396 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 OR1E1P30953 314 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 STX2P32856 288 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 YWHAGP61981 247 aaKnown RBP eCLIP6.14□□□□□ -1.43
CPS1-207ENST00000479988 KDSRQ06136 332 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 CCNG2Q16589 344 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 MPPE1Q53F39 396 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 THEMIS2Q5TEJ8 643 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 SDHAF4Q5VUM1 108 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 TRPV1Q8NER1 839 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 HDAC7Q8WUI4 952 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 DEPDC1BQ8WUY9 529 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 CPA5Q8WXQ8 436 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 MCEEQ96PE7 176 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 C17orf80Q9BSJ5 609 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 TRIM7Q9C029 511 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 AGO3Q9H9G7 860 aaKnown RBP6.14□□□□□ -1.43
CPS1-207ENST00000479988 TMBIM4Q9HC24 238 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 METTL5Q9NRN9 209 aaKnown RBP6.14□□□□□ -1.43
CPS1-207ENST00000479988 SALL4Q9UJQ4 1053 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 C3orf70A6NLC5 250 aaPredicted RBP6.14□□□□□ -1.43
CPS1-207ENST00000479988 AP3B1O00203 1094 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 SCAMP3O14828 347 aaKnown RBP6.14□□□□□ -1.43
CPS1-207ENST00000479988 PSMD3O43242 534 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 CTSAP10619 480 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 SAT1P21673 171 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 TNFSF9P41273 254 aa6.14□□□□□ -1.43
CPS1-207ENST00000479988 IL9RQ01113 521 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms