RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 ZMYND8Q9ULU4 1186 aaPredicted RBP10.19□□□□□ -0.78
RAD51B-208ENST00000479335 HTTP42858 3142 aa10.19□□□□□ -0.78
RAD51B-208ENST00000479335 TET1Q8NFU7 2136 aa10.19□□□□□ -0.78
RAD51B-208ENST00000479335 FAM92AA1XBS5 289 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TBKBP1A7MCY6 615 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 PPP1R12AO14974 1030 aaPredicted RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 DCLK1O15075 740 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 STK10O94804 968 aaKnown RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 RTN3O95197 1032 aaPredicted RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ACSL3O95573 720 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 PHBP35232 272 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 PSEN1P49768 467 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 CDK16Q00536 496 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 DMTNQ08495 405 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 AUHQ13825 339 aaKnown RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 PPP2R5DQ14738 602 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TCTN1Q2MV58 587 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 HEATR6Q6AI08 1181 aaKnown RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 MSANTD2Q6P1R3 559 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TAOK1Q7L7X3 1001 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TDRPQ86YL5 185 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 SCN4BQ8IWT1 228 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 SCAMP5Q8TAC9 235 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 HTR3CQ8WXA8 447 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 EDEM1Q92611 657 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 SCLYQ96I15 445 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 SPATA17Q96L03 361 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 C9orf72Q96LT7 481 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 EPAS1Q99814 870 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 MAGEB5Q9BZ81 275 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 GPR62Q9BZJ7 368 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 SMOC2Q9H3U7 446 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 C10orf88Q9H8K7 445 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ARHGEF38Q9NXL2 777 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ABI2Q9NYB9 513 aaPredicted RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 LGALS13Q9UHV8 139 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 XPO7Q9UIA9 1087 aaKnown RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 FNDC1Q4ZHG4 1894 aaPredicted RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 SYNJ2BP-COX16A0A087WUM0 186 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TLDC2A0PJX2 215 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 IRAK2O43187 625 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 CREB3O43889 395 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 CDH16O75309 829 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 SPAG6O75602 509 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 EFEMP2O95967 443 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ATP2A2P16615 1042 aaKnown RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ERCC2P18074 760 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TPSB2P20231 275 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 SERPINB6P35237 376 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 FDFT1P37268 417 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 MDH1P40925 334 aaKnown RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 IRAK1P51617 712 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 RABGGTBP53611 331 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ATN1P54259 1190 aaPredicted RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 CCL23P55773 120 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TPI1P60174 286 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 MAGOHP61326 146 aaKnown RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 BASP1P80723 227 aaKnown RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 NRG1Q02297 640 aaPredicted RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ZNF33AQ06730 810 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 PDIA2Q13087 525 aaKnown RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 NR1H3Q13133 447 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 PRKD1Q15139 912 aaPredicted RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TPSAB1Q15661 275 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TRIM60Q495X7 471 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ACBD5Q5T8D3 534 aaPredicted RBP10.18□□□□□ -0.78
RAD51B-208ENST00000479335 SCD5Q86SK9 330 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TAC4Q86UU9 113 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 PYROXD1Q8WU10 500 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 CENPTQ96BT3 561 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 LRRC39Q96DD0 335 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ZNF333Q96JL9 665 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 PWWP2AQ96N64 755 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TTPALQ9BTX7 342 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 TKTL2Q9H0I9 626 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 LRRC4CQ9HCJ2 640 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 RAB6BQ9NRW1 208 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 ETNK2Q9NVF9 386 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 COX16Q9P0S2 106 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 OR12D3Q9UGF7 316 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 VWA8A3KMH1 1905 aa10.18□□□□□ -0.78
RAD51B-208ENST00000479335 A0A0A0MRY4 1105 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 ABHD14A-ACY1A0A1B0GW23 586 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 MTSS1O43312 755 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 OPHN1O60890 802 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 EFCAB14O75071 495 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 OR4Q2P0C623 313 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 SLC2A3P11169 496 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 MX2P20592 715 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 CCR1P32246 355 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 ALDH7A1P49419 539 aaKnown RBP10.17□□□□□ -0.78
RAD51B-208ENST00000479335 GATMP50440 423 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 RPL10AP62906 217 aaKnown RBP10.17□□□□□ -0.78
RAD51B-208ENST00000479335 SARNPP82979 210 aaKnown RBP10.17□□□□□ -0.78
RAD51B-208ENST00000479335 MTA1Q13330 715 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 USP41Q3LFD5 358 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 CCDC38Q502W7 563 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 ANKRD22Q5VYY1 191 aa10.17□□□□□ -0.78
RAD51B-208ENST00000479335 FBXO46Q6PJ61 603 aaPredicted RBP10.17□□□□□ -0.78
RAD51B-208ENST00000479335 LEKR1Q6ZMV7 388 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms