RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 PDZD8Q8NEN9 1154 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 DQX1Q8TE96 717 aaKnown RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 PRCCQ92733 491 aaPredicted RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 C1orf74Q96LT6 269 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 TANC1Q9C0D5 1861 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 C11orf49Q9H6J7 331 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 CATSPERBQ9H7T0 1116 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 XAB2Q9HCS7 855 aaKnown RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 EIF2B3Q9NR50 452 aaKnown RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 ARHGEF4Q9NR80 690 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 PIGVQ9NUD9 493 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 TMLHEQ9NVH6 421 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 MARCH5Q9NX47 278 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 ABI2Q9NYB9 513 aaPredicted RBP10.54□□□□□ -0.72
MSH5-213ENST00000468136 SENP1Q9P0U3 644 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 DNAJB4Q9UDY4 337 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 SSX2IPQ9Y2D8 614 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 HEY1Q9Y5J3 304 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 ACTL7BQ9Y614 415 aa10.54□□□□□ -0.72
MSH5-213ENST00000468136 ERI2A8K979 691 aaKnown RBP10.53□□□□□ -0.72
MSH5-213ENST00000468136 KIAA0355O15063 1070 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 DCLK1O15075 740 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 PSMD3O43242 534 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 SHOX2O60902 331 aaPredicted RBP10.53□□□□□ -0.72
MSH5-213ENST00000468136 HAPLN1P10915 354 aaPredicted RBP10.53□□□□□ -0.72
MSH5-213ENST00000468136 MLNP12872 115 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 GOT1P17174 413 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 LAG3P18627 525 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 TFE3P19532 575 aaPredicted RBP10.53□□□□□ -0.72
MSH5-213ENST00000468136 IGFBP6P24592 240 aaPredicted RBP10.53□□□□□ -0.72
MSH5-213ENST00000468136 DNAJB2P25686 324 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 YWHAQP27348 245 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 HOXC13P31276 330 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 PPP3CCP48454 512 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 MNX1P50219 401 aaPredicted RBP10.53□□□□□ -0.72
MSH5-213ENST00000468136 KLHL38Q2WGJ6 581 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 ARMC3Q5W041 872 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 TPGS2Q68CL5 300 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 SLC8B1Q6J4K2 584 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 C1orf228Q6PIY5 440 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 LEKR1Q6ZMV7 388 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 DENND5BQ6ZUT9 1274 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 HFE2Q6ZVN8 426 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 GPRIN1Q7Z2K8 1008 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 ZC3H18Q86VM9 953 aaKnown RBP10.53□□□□□ -0.72
MSH5-213ENST00000468136 SCN4BQ8IWT1 228 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 TMEM199Q8N511 208 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 HTR3CQ8WXA8 447 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 RIN2Q8WYP3 895 aaPredicted RBP10.53□□□□□ -0.72
MSH5-213ENST00000468136 CPT1BQ92523 772 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 RNF34Q969K3 372 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 ARL8AQ96BM9 186 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 TLCD1Q96CP7 247 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 NAT9Q9BTE0 207 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 TLR8Q9NR97 1041 aaKnown RBP10.53□□□□□ -0.72
MSH5-213ENST00000468136 GPATCH2LQ9NWQ4 482 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 NINJ2Q9NZG7 142 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 DTLQ9NZJ0 730 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 MTRRQ9UBK8 725 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 SLC24A2Q9UI40 661 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 TRHDEQ9UKU6 1024 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 TLR6Q9Y2C9 796 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 CLUHO75153 1309 aa10.53□□□□□ -0.72
MSH5-213ENST00000468136 A0A0A0MRY4 1105 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 EFEMP2O95967 443 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 TIMP1P01033 207 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 ZSCAN5DPP0CG00 497 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 CPB1P15086 417 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 AMPD1P23109 780 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 RBL1P28749 1068 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 CHKAP35790 457 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 PPM1AP35813 382 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 ATN1P54259 1190 aaPredicted RBP10.52□□□□□ -0.73
MSH5-213ENST00000468136 CACNA2D1P54289 1103 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 CCL23P55773 120 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 PPP2R2AP63151 447 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 BASP1P80723 227 aaKnown RBP10.52□□□□□ -0.73
MSH5-213ENST00000468136 RING1Q06587 406 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 SEMA5AQ13591 1074 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 KCNJ11Q14654 390 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 PRKD1Q15139 912 aaPredicted RBP10.52□□□□□ -0.73
MSH5-213ENST00000468136 CCDC38Q502W7 563 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 TNFAIP8L3Q5GJ75 292 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 ITPRIPL1Q6GPH6 555 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 KCNT2Q6UVM3 1135 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 ARHGEF18Q6ZSZ5 1173 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 NECAB2Q7Z6G3 386 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 TAC4Q86UU9 113 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 CEP57Q86XR8 500 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 RNF168Q8IYW5 571 aaPredicted RBP10.52□□□□□ -0.73
MSH5-213ENST00000468136 PYROXD1Q8WU10 500 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 TOP1MTQ969P6 601 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 CENPTQ96BT3 561 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 HDAC11Q96DB2 347 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 SPATA13Q96N96 652 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 ZNF558Q96NG5 402 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 TMEM209Q96SK2 561 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 FAM118BQ9BPY3 351 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 TTLL2Q9BWV7 592 aa10.52□□□□□ -0.73
MSH5-213ENST00000468136 CAPS2Q9BXY5 557 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms