RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 JADE3Q92613 823 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 ZNF668Q96K58 619 aaPredicted RBP13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 PTPRHQ9HD43 1115 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 ADAMTS5Q9UNA0 930 aa13.4□□□□□ -0.27
PDZRN3-205ENST00000466780 LOC100653049A0A140TA62 436 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 ADCY6O43306 1168 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 ZMPSTE24O75844 475 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 KRT34O76011 436 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 NFICP08651 508 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 TPSB2P20231 275 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 GMPRP36959 345 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 SLC10A2Q12908 348 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 TPSAB1Q15661 275 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 MMEL1Q495T6 779 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 MAP1SQ66K74 1059 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 PDPK2PQ6A1A2 396 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 SAMD7Q7Z3H4 446 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 LRRC71Q8N4P6 559 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 SNRNP25Q9BV90 132 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 ACAD9Q9H845 621 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 NRBP2Q9NSY0 501 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 DNAJC28Q9NX36 388 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 BTBD7Q9P203 1132 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 FZD1Q9UP38 647 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 AFG3L2Q9Y4W6 797 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 CASQ2O14958 399 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 SERPINE1P05121 402 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 ALOX15P16050 662 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 UBA1P22314 1058 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 OAZ1P54368 228 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 BACE1P56817 501 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 CRADDP78560 199 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 GBE1Q04446 702 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 NBPF12Q5TAG4 269 aaPredicted RBP13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 MPZL3Q6UWV2 235 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 HEXIM2Q96MH2 286 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 CAMKK2Q96RR4 588 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 NGRNQ9NPE2 291 aaKnown RBP13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 XPNPEP3Q9NQH7 507 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 NR2E3Q9Y5X4 410 aa13.39□□□□□ -0.27
PDZRN3-205ENST00000466780 PHIPQ8WWQ0 1821 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 WDR27A2RRH5 827 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 GLRA3O75311 464 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 GCATO75600 419 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 ALDH1A2O94788 518 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 STK10O94804 968 aaKnown RBP13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 FARP2O94887 1054 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 SMIM18P0DKX4 95 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 CNTFP26441 200 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 SERPINB6P35237 376 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 STAT5BP51692 787 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 NIPAL4Q0D2K0 466 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 PRKG1Q13976 671 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 STXBP2Q15833 593 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 ANKRD20A4Q4UJ75 823 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 PABPC1LQ4VXU2 614 aaKnown RBP13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 BOLA3Q53S33 107 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 PRAMEF18Q5VWM3 479 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 STEAP4Q687X5 459 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 PACS1Q6VY07 963 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 AEBP2Q6ZN18 517 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 KBTBD6Q86V97 674 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 NME8Q8N427 588 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 CXorf38Q8TB03 319 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 ACMSDQ8TDX5 336 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 OPTNQ96CV9 577 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 NRDE2Q9H7Z3 1164 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 PSAT1Q9Y617 370 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 ITGB3P05106 788 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 PFKMP08237 780 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 VAV1P15498 845 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 TBL3Q12788 808 aaKnown RBP13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 PPP6R3Q5H9R7 873 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 PPM1JQ5JR12 505 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 SMYD5Q6GMV2 418 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 TSHZ1Q6ZSZ6 1077 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 CYS1Q717R9 158 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 SPATA24Q86W54 205 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 FBXW8Q8N3Y1 598 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 DTNBP1Q96EV8 351 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 NLRP4Q96MN2 994 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 MAGEB5Q9BZ81 275 aa13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 GBA2Q9HCG7 927 aaPredicted RBP13.38□□□□□ -0.27
PDZRN3-205ENST00000466780 F5H423 210 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 TXNDC9O14530 226 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 AP1G1O43747 822 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 ZBTB14O43829 449 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 GJB1P08034 283 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 VDRP11473 427 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 CD1EP15812 388 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 NCF2P19878 526 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 RGS7P49802 495 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 CHN2P52757 468 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 FOLH1Q04609 750 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 TBC1D25Q3MII6 688 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 ATF7IP2Q5U623 682 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 IER5Q5VY09 327 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 CDKL3Q8IVW4 592 aaPredicted RBP13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 TEX13BQ9BXU2 312 aa13.37□□□□□ -0.27
PDZRN3-205ENST00000466780 TMEM216Q9P0N5 145 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms