RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, human

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATF3-208	ENST00000465155	DHX35	Q9H5Z1	703 aa	Known RBP	13.9	□□□□□ -0.18
ATF3-208	ENST00000465155	TASP1	Q9H6P5	420 aa		13.9	□□□□□ -0.18
ATF3-208	ENST00000465155	GKN1	Q9NS71	199 aa		13.9	□□□□□ -0.18
ATF3-208	ENST00000465155	SMPD4	Q9NXE4	827 aa		13.9	□□□□□ -0.18
ATF3-208	ENST00000465155	ARHGEF38	Q9NXL2	777 aa		13.9	□□□□□ -0.18
ATF3-208	ENST00000465155	LRRD1	A4D1F6	860 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	PI4K2B	G5E9Z4	385 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155		I6L893	689 aa	Predicted RBP	13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	URI1	O94763	535 aa	Predicted RBP	13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	IGLV3-27	P01718	113 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	APOE	P02649	317 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	IRF1	P10914	325 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	TCP1	P17987	556 aa	Known RBP	13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	FSHR	P23945	695 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	AVPR1A	P37288	418 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	KCNQ1	P51787	676 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	AMPD2	Q01433	879 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	ZNF211	Q13398	564 aa	Predicted RBP	13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	CCDC85B	Q15834	202 aa	Predicted RBP	13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	CA9	Q16790	459 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	CCDC50	Q8IVM0	306 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	CMTM8	Q8IZV2	173 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	KCTD6	Q8NC69	237 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	EXD1	Q8NHP7	514 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	RAPGEF5	Q92565	580 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	RNF25	Q96BH1	459 aa	Predicted RBP	13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	ZFR	Q96KR1	1074 aa	Known RBP	13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	MAGEB5	Q9BZ81	275 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	CPQ	Q9Y646	472 aa		13.9	□□□□□ -0.19
ATF3-208	ENST00000465155	CLUH	O75153	1309 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	KCNU1	A8MYU2	1149 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	ZNF185	O15231	689 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	STC2	O76061	302 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	PYGM	P11217	842 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	PRLR	P16471	622 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	KDELR1	P24390	212 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	CDH6	P55285	790 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	SLC7A9	P82251	487 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	SCAP	Q12770	1279 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	KRT81	Q14533	505 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	CBX2	Q14781	532 aa	Predicted RBP	13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	ATAT1	Q5SQI0	421 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	NUGGC	Q68CJ6	796 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	AADACL2	Q6P093	401 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	GET4	Q7L5D6	327 aa	Predicted RBP	13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	PSTK	Q8IV42	348 aa	Known RBP	13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	UNC45B	Q8IWX7	931 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	RCOR2	Q8IZ40	523 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	PYROXD2	Q8N2H3	581 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	ATP6V0D2	Q8N8Y2	350 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	TTC16	Q8NEE8	873 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	COG1	Q8WTW3	980 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	PLD4	Q96BZ4	506 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	RBM41	Q96IZ5	413 aa	Known RBP	13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	MSLNL	Q96KJ4	702 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	GUCD1	Q96NT3	240 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	SMG9	Q9H0W8	520 aa	Known RBP	13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	CARD9	Q9H257	536 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	SLC12A6	Q9UHW9	1150 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	XPO7	Q9UIA9	1087 aa	Known RBP	13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	ZMYM5	Q9UJ78	669 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	EYS	Q5T1H1	3165 aa		13.89	□□□□□ -0.19
ATF3-208	ENST00000465155	SOBP	A7XYQ1	873 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	CEP104	O60308	925 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	PAGE1	O75459	146 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	CD48	P09326	243 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	FOSL2	P15408	326 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	L1CAM	P32004	1257 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	GGCX	P38435	758 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	HARS2	P49590	506 aa	Known RBP	13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	ZXDB	P98169	803 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	CLUL1	Q15846	466 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	DPYSL2	Q16555	572 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	SEL1L2	Q5TEA6	688 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	PBK	Q96KB5	322 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	BTN2A3P	Q96KV6	586 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	ZSWIM3	Q96MP5	696 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	HAPLN3	Q96S86	360 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	CALN1	Q9BXU9	219 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	SIK2	Q9H0K1	926 aa		13.88	□□□□□ -0.19
ATF3-208	ENST00000465155	C3orf70	A6NLC5	250 aa	Predicted RBP	13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	CES2	O00748	559 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	CORO1A	P31146	461 aa	Known RBP	13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	ARSE	P51690	589 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	DPYSL3	Q14195	570 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	PDK2	Q15119	407 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	LLGL1	Q15334	1064 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	SKIV2L	Q15477	1246 aa	Known RBP	13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	MFSD7	Q6UXD7	560 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	SPOCD1	Q6ZMY3	1216 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	DENND4A	Q7Z401	1863 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	DENND1C	Q8IV53	801 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	MAP7D3	Q8IWC1	876 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	NPAS3	Q8IXF0	933 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	ADAMTS19	Q8TE59	1207 aa		13.87	□□□□□ -0.19
ATF3-208	ENST00000465155	PPM1E	Q8WY54	764 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms