RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 MED10Q9BTT4 135 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 GTPBP2Q9BX10 602 aaKnown RBP8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 IMPG2Q9BZV3 1241 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 SLC32A1Q9H598 525 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 NMUR1Q9HB89 426 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 CISHQ9NSE2 258 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 FAM49BQ9NUQ9 324 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 DNAJC17Q9NVM6 304 aaKnown RBP8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 COMMD8Q9NX08 183 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 ARID1BQ8NFD5 2236 aaPredicted RBP8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 MYLKQ15746 1914 aa8.33□□□□□ -1.08
CDC42BPA-210ENST00000462553 PTPRQQ9UMZ3 2332 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 FLNBO75369 2602 aaKnown RBP8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 WASH3PC4AMC7 463 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 P4HA2O15460 535 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 OPHN1O60890 802 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 GNA14O95837 355 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 CD58P19256 250 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 RAD23BP54727 409 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 MAP3K7CLP57077 242 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 GFPT1Q06210 699 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 CUL2Q13617 745 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 PREPLQ4J6C6 727 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 RABEPKQ7Z6M1 372 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 ARHGEF19Q8IW93 802 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 CHPFQ8IZ52 775 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 CHCHD4Q8N4Q1 142 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 SLC4A11Q8NBS3 891 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 KAT5Q92993 513 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 ZNF419Q96HQ0 510 aaPredicted RBP8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 MRGPRX1Q96LB2 322 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 CAMK1GQ96NX5 476 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 BBS2Q9BXC9 721 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 NT5C1AQ9BXI3 368 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 FBXO44Q9H4M3 255 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 TLR8Q9NR97 1041 aaKnown RBP8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 CACNA2D2Q9NY47 1150 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 FBXO10Q9UK96 956 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 SCML2Q9UQR0 700 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 DOCK9Q9BZ29 2069 aa8.32□□□□□ -1.08
CDC42BPA-210ENST00000462553 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 A0A1W2PQH9 124 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 KCNJ18B7U540 433 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 H0Y626 953 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 SH3BP5O60239 455 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 CBFA2T3O75081 653 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 ZNF217O75362 1048 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 TRIM16O95361 564 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 PENKP01210 267 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 AFPP02771 609 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 KLKB1P03952 638 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 ACO1P21399 889 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 DGKGP49619 791 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 ATXN3P54252 364 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 LRMPQ12912 555 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 GRIK2Q13002 908 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 ENPP2Q13822 863 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 ZNF423Q2M1K9 1284 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 FUT11Q495W5 492 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 ZNF394Q53GI3 561 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 PPP1R26Q5T8A7 1209 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 KLHDC10Q6PID8 442 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 LRSAM1Q6UWE0 723 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 TPGS1Q6ZTW0 290 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 SCD5Q86SK9 330 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 PROSER1Q86XN7 944 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 HDDC3Q8N4P3 179 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 RBBP8NLQ8NC74 664 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 BHMTQ93088 406 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 KREMEN1Q96MU8 473 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 XPO6Q96QU8 1125 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 HNRNPABQ99729 332 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 MKRN2Q9H000 416 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 NACA2Q9H009 215 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 INTS2Q9H0H0 1204 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 FAM124BQ9H5Z6 455 aaPredicted RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 PLK2Q9NYY3 685 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 TMEM63CQ9P1W3 806 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 USP36Q9P275 1121 aaKnown RBP8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 NUDT5Q9UKK9 219 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 LHX6Q9UPM6 363 aa8.31□□□□□ -1.08
CDC42BPA-210ENST00000462553 SHROOM3Q8TF72 1996 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 GFRA2O00451 464 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 STC2O76061 302 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 FGFR1OPO95684 399 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 MBD3O95983 291 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 NUDT7P0C024 238 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 FTH1P19P0C7X4 201 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 FAM200BP0CF97 657 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 RARGP13631 454 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 MAOBP27338 520 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 ERCC5P28715 1186 aaPredicted RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 ADORA2BP29275 332 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 ATP5C1P36542 298 aaKnown RBP8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 IL12RB1P42701 662 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 KIF11P52732 1056 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 ZNF132P52740 706 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 MFAP3P55082 362 aa8.3□□□□□ -1.08
CDC42BPA-210ENST00000462553 BNC1Q01954 994 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms