RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 BPIFB1Q8TDL5 484 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 DEPDC1BQ8WUY9 529 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 ASB2Q96Q27 587 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 WDCPQ9H6R7 721 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 KCND1Q9NSA2 647 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 ARHGEF38Q9NXL2 777 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 CFAP97Q9P2B7 532 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 STOML2Q9UJZ1 356 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 LSM7Q9UK45 103 aaKnown RBP12.04□□□□□ -0.48
SCN9A-204ENST00000452182 ZNF510Q9Y2H8 683 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 SH3BP1Q9Y3L3 701 aa12.04□□□□□ -0.48
SCN9A-204ENST00000452182 A0A0U1RQJ8 604 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 LRCH4O75427 683 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 APOEP02649 317 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 KLKB1P03952 638 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 SLC1A1P43005 524 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 ARHGAP29Q52LW3 1261 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 ZC3H12AQ5D1E8 599 aaKnown RBP12.03□□□□□ -0.48
SCN9A-204ENST00000452182 C11orf63Q6NUN7 778 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 PARM1Q6UWI2 310 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 Q6ZNB5 142 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 MFSD6LQ8IWD5 586 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 ARFGAP1Q8N6T3 406 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 TPCN2Q8NHX9 752 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 RIN3Q8TB24 985 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 UBE2Q2Q8WVN8 375 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 ATRIPQ8WXE1 791 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 FGF14Q92915 247 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 NTAN1Q96AB6 310 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 OTUB2Q96DC9 234 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 RSPRY1Q96DX4 576 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 BTBD6Q96KE9 485 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 RPGRIP1Q96KN7 1286 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 BTN2A3PQ96KV6 586 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 LRRC3BQ96PB8 259 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 IGSF9Q9P2J2 1179 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 TBC1D14Q9P2M4 693 aa12.03□□□□□ -0.48
SCN9A-204ENST00000452182 SYNJ2BP-COX16A0A087WUM0 186 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 HEPACAM2A8MVW5 462 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 BUB1BO60566 1050 aaPredicted RBP12.02□□□□□ -0.49
SCN9A-204ENST00000452182 HMBSP08397 361 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 BMP1P13497 986 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 PSMC3P17980 439 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 ATXN1P54253 815 aaKnown RBP12.02□□□□□ -0.49
SCN9A-204ENST00000452182 ZP2Q05996 745 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 SCAPQ12770 1279 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 MESDQ14696 234 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 ARL13BQ3SXY8 428 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 RAB6CQ53S08 254 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 VITQ6UXI7 678 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 REXO1L1PQ8IX06 675 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 FAM217AQ8IXS0 508 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 RNF34Q969K3 372 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
SCN9A-204ENST00000452182 RAB6CQ9H0N0 254 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 THG1LQ9NWX6 298 aaKnown RBP12.02□□□□□ -0.49
SCN9A-204ENST00000452182 COX16Q9P0S2 106 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 TRIM10Q9UDY6 481 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 SLC12A6Q9UHW9 1150 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 AGO1Q9UL18 857 aaKnown RBP12.02□□□□□ -0.49
SCN9A-204ENST00000452182 PYCARDQ9ULZ3 195 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 NUMBLQ9Y6R0 609 aa12.02□□□□□ -0.49
SCN9A-204ENST00000452182 MACROD2A1Z1Q3 448 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 GOLGA6L9A6NEM1 432 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 SLC9A3R1O14745 358 aaPredicted RBP12.01□□□□□ -0.49
SCN9A-204ENST00000452182 BUB1O43683 1085 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 IRF1P10914 325 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 SP100P23497 879 aaPredicted RBP12.01□□□□□ -0.49
SCN9A-204ENST00000452182 MIPP30301 263 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 CORO1AP31146 461 aaKnown RBP12.01□□□□□ -0.49
SCN9A-204ENST00000452182 ADRA1BP35368 520 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 SLC11A2P49281 568 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 NAP1L1P55209 391 aaKnown RBP12.01□□□□□ -0.49
SCN9A-204ENST00000452182 CC2D1AQ6P1N0 951 aaPredicted RBP12.01□□□□□ -0.49
SCN9A-204ENST00000452182 SLFN11Q7Z7L1 901 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 FAM131BQ86XD5 332 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 PSTKQ8IV42 348 aaKnown RBP12.01□□□□□ -0.49
SCN9A-204ENST00000452182 DENND1CQ8IV53 801 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 ATP6V0D2Q8N8Y2 350 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 LRRC57Q8N9N7 239 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 OSCP1Q8WVF1 389 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 WBP2Q969T9 261 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 TRIM44Q96DX7 344 aaPredicted RBP12.01□□□□□ -0.49
SCN9A-204ENST00000452182 C1orf74Q96LT6 269 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 HAPLN3Q96S86 360 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 TKTL2Q9H0I9 626 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 KCNK12Q9HB15 430 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 LZTFL1Q9NQ48 299 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 USP18Q9UMW8 372 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 GUCA1BQ9UMX6 200 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 ALG6Q9Y672 507 aa12.01□□□□□ -0.49
SCN9A-204ENST00000452182 I6L893 689 aaPredicted RBP12□□□□□ -0.49
SCN9A-204ENST00000452182 PRPSAP2O60256 369 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 ACSL4O60488 711 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 CHKAP35790 457 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 SLC25A11Q02978 314 aaKnown RBP12□□□□□ -0.49
SCN9A-204ENST00000452182 HADHQ16836 314 aaKnown RBP12□□□□□ -0.49
SCN9A-204ENST00000452182 BOLA3Q53S33 107 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 ADGRF1Q5T601 910 aa12□□□□□ -0.49
SCN9A-204ENST00000452182 CYP4V2Q6ZWL3 525 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms