RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 HFE2Q6ZVN8 426 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 PAQR9Q6ZVX9 377 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 KIF2BQ8N4N8 673 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 PPM1NQ8N819 430 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 WNT8BQ93098 351 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 KLC2Q9H0B6 622 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 UGT1A7Q9HAW7 530 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 UGT1A10Q9HAW8 530 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 UGT1A8Q9HAW9 530 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 PLAC1Q9HBJ0 212 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 PAPOLBQ9NRJ5 636 aaKnown RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 DTLQ9NZJ0 730 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 KLHL14Q9P2G3 628 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 MAD1L1Q9Y6D9 718 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 IKBKGQ9Y6K9 419 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 RALGAPA2Q2PPJ7 1873 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 MLH1P40692 756 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 PURAQ00577 322 aaKnown RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 SEPT7Q16181 437 aaKnown RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 PDK4Q16654 411 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 TP53INP2Q8IXH6 220 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 ANKLE1Q8NAG6 615 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 GAD1Q99259 594 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 MED10Q9BTT4 135 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 ZC3H7BQ9UGR2 993 aaKnown RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 MT-ND3P03897 115 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 INHBAP08476 426 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 PNPLA4P41247 253 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 KCNJ2P63252 427 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 ROR2Q01974 943 aaKnown RBP12.48□□□□□ -0.41
COL27A1-202ENST00000451716 SLC45A4Q5BKX6 768 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 XKR4Q5GH76 650 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 NCBP2-AS2Q69YL0 99 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 CXCL17Q6UXB2 119 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 DENND5BQ6ZUT9 1274 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 RTP4Q96DX8 246 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 TNIP3Q96KP6 325 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 ECT2Q9H8V3 914 aa12.48□□□□□ -0.41
COL27A1-202ENST00000451716 XPOTO43592 962 aaKnown RBP12.47□□□□□ -0.41
COL27A1-202ENST00000451716 CREB3O43889 395 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 DNAJC8O75937 253 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-202ENST00000451716 PGK1P00558 417 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 PTPN1P18031 435 aaKnown RBP12.47□□□□□ -0.41
COL27A1-202ENST00000451716 MATKP42679 507 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 CRADDP78560 199 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 OVGP1Q12889 678 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 XRCC4Q13426 336 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 RASA2Q15283 850 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 PCBP1Q15365 356 aaKnown RBP eCLIP12.47□□□□□ -0.413e-6■■■□□ 16.6
COL27A1-202ENST00000451716 BANPQ8N9N5 519 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 ZNF75CPQ92670 426 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-202ENST00000451716 USP6NLQ92738 828 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 KCNK16Q96T55 309 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 PAAF1Q9BRP4 392 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 DUSP16Q9BY84 665 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 POPDC2Q9HBU9 364 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 SMYD2Q9NRG4 433 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 MIOSQ9NXC5 875 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 I3L4J1 428 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
COL27A1-202ENST00000451716 VAV1P15498 845 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 NCALDP61601 193 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 SNCBQ16143 134 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 PAN2Q504Q3 1202 aaKnown RBP12.47□□□□□ -0.41
COL27A1-202ENST00000451716 GNASQ5JWF2 1037 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 OTUD1Q5VV17 481 aaPredicted RBP12.47□□□□□ -0.41
COL27A1-202ENST00000451716 TRMT10BQ6PF06 316 aaKnown RBP12.47□□□□□ -0.41
COL27A1-202ENST00000451716 VPS52Q8N1B4 723 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 RNF169Q8NCN4 708 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 GSTCDQ8NEC7 633 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 SLC44A1Q8WWI5 657 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 PTPRN2Q92932 1015 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 HSFY1Q96LI6 401 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 RHOBTB2Q9BYZ6 727 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 PPCSQ9HAB8 311 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 TMEM30AQ9NV96 361 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 DDX43Q9NXZ2 648 aaKnown RBP12.47□□□□□ -0.41
COL27A1-202ENST00000451716 TTLL3Q9Y4R7 772 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 CDY2AQ9Y6F7 541 aa12.47□□□□□ -0.41
COL27A1-202ENST00000451716 ZNF638Q14966 1978 aaKnown RBP12.46□□□□□ -0.41
COL27A1-202ENST00000451716 M0QYT0 321 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 NRP1O14786 923 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 MFSD11O43934 449 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 NPR3P17342 541 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 CTGFP29279 349 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 ACADSBP45954 432 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 RPL34P49207 117 aaKnown RBP12.46□□□□□ -0.41
COL27A1-202ENST00000451716 CLCNKBP51801 687 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 CACNA2D1P54289 1103 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 BMPR2Q13873 1038 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 SLC25A52Q3SY17 297 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 GALNTL6Q49A17 601 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 HEATR6Q6AI08 1181 aaKnown RBP12.46□□□□□ -0.41
COL27A1-202ENST00000451716 CLEC20AQ6ZU45 233 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 ZNF534Q76KX8 674 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 LIMS2Q7Z4I7 341 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 CDKL3Q8IVW4 592 aaPredicted RBP12.46□□□□□ -0.41
COL27A1-202ENST00000451716 UNC5BQ8IZJ1 945 aa12.46□□□□□ -0.41
COL27A1-202ENST00000451716 C3orf58Q8NDZ4 430 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms