RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 GRAP2O75791 330 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 RHOBTB1O94844 696 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 GABRG2P18507 467 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 NDUFV2P19404 249 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 HOXD9P28356 352 aaPredicted RBP10.08□□□□□ -0.8
USP54-207ENST00000451492 ERCC5P28715 1186 aaPredicted RBP10.08□□□□□ -0.8
USP54-207ENST00000451492 SLC6A4P31645 630 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 IL12RB1P42701 662 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 ACADSBP45954 432 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 TAF5Q15542 800 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 CSRP2Q16527 193 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 HSF5Q4G112 596 aaPredicted RBP10.08□□□□□ -0.8
USP54-207ENST00000451492 MPPE1Q53F39 396 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 TAF3Q5VWG9 929 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 SYPL2Q5VXT5 272 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 PMS2CLQ68D20 193 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 MSANTD2Q6P1R3 559 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 CYP2U1Q7Z449 544 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 TAC4Q86UU9 113 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 SLC47A2Q86VL8 602 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 SCML4Q8N228 414 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 CPXM2Q8N436 756 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 ZNF366Q8N895 744 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 WFDC5Q8TCV5 224 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 IPO4Q8TEX9 1081 aaKnown RBP10.08□□□□□ -0.8
USP54-207ENST00000451492 SHC3Q92529 594 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 FAM81BQ96LP2 452 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 SERPINB11Q96P15 392 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 VPS16Q9H269 839 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 PDCL3Q9H2J4 239 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 RXFP3Q9NSD7 469 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 CYP8B1Q9UNU6 501 aa10.08□□□□□ -0.8
USP54-207ENST00000451492 A0A1W2PQF6 199 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 GTPBP10A4D1E9 387 aaKnown RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 PRR5-ARHGAP8B1AHC4 643 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 PATE3B3GLJ2 98 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 ACSL4O60488 711 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 LRP3O75074 770 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 FYNP06241 537 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 KRT9P35527 623 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 P2RY2P41231 377 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 SLC11A2P49281 568 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 KLK7P49862 253 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 PITX1P78337 314 aaPredicted RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 ARHGAP8P85298 464 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 RPL6Q02878 288 aaKnown RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 PTK2Q05397 1052 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 PUM1Q14671 1186 aaKnown RBP eCLIP10.07□□□□□ -0.8
USP54-207ENST00000451492 FNDC3BQ53EP0 1204 aaKnown RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 TCP11X2Q5H9J9 407 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 NUGGCQ68CJ6 796 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 OR6B2Q6IFH4 312 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 SASS6Q6UVJ0 657 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 CLEC17AQ6ZS10 378 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 FAM183BPQ6ZVS7 135 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 CHST9Q7L1S5 443 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 FAM217AQ8IXS0 508 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 CARNMT1Q8N4J0 409 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 CYB5D2Q8WUJ1 264 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 UCMAQ8WVF2 138 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 PIGKQ92643 395 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 TMA16Q96EY4 203 aaKnown RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 ZC3H10Q96K80 434 aaKnown RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 FCRL2Q96LA5 508 aaPredicted RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 PRICKLE1Q96MT3 831 aaPredicted RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 CPXM1Q96SM3 734 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 NUCKS1Q9H1E3 243 aaKnown RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 SYNCQ9H7C4 482 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 FAM204AQ9H8W3 233 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 POPDC2Q9HBU9 364 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 ABCB8Q9NUT2 735 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 MBD1Q9UIS9 605 aaPredicted RBP10.07□□□□□ -0.8
USP54-207ENST00000451492 STARD13Q9Y3M8 1113 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 STON1Q9Y6Q2 735 aa10.07□□□□□ -0.8
USP54-207ENST00000451492 MED19A0JLT2 244 aaPredicted RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 TYW5A2RUC4 315 aaKnown RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 FOXN3O00409 490 aaPredicted RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 ZBTB24O43167 697 aaPredicted RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 SART1O43290 800 aaKnown RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 CAVIN2O95810 425 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 IGLV3-27P01718 113 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 APOEP02649 317 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 ERBB2P04626 1255 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 EPHX1P07099 455 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 HLA-EP13747 358 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 PRKCHP24723 683 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 HLA-FP30511 346 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 CLCN1P35523 988 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 PTGER3P43115 390 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 ATXN1P54253 815 aaKnown RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 ZNF234Q14588 700 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 STARD3Q14849 445 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 DRAP1Q14919 205 aaPredicted RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 DCAF6Q58WW2 860 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 FAM133BQ5BKY9 247 aaKnown RBP10.06□□□□□ -0.8
USP54-207ENST00000451492 ADGRF1Q5T601 910 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 RAP1GAP2Q684P5 730 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 TMEM215Q68D42 235 aa10.06□□□□□ -0.8
USP54-207ENST00000451492 NADSYN1Q6IA69 706 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms