RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 RHOT1Q8IXI2 618 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 FAM71AQ8IYT1 594 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 KATNAL2Q8IYT4 538 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 PIWIL2Q8TC59 973 aaKnown RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 SLC44A1Q8WWI5 657 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 KAT5Q92993 513 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 COA7Q96BR5 231 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 DYNLL2Q96FJ2 89 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 SENP7Q9BQF6 1050 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 ZBED2Q9BTP6 218 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 ZNF341Q9BYN7 854 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 FRMD8Q9BZ67 464 aaPredicted RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 TMEM117Q9H0C3 514 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 CD209Q9NNX6 404 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 RIC8BQ9NVN3 520 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 THAP1Q9NVV9 213 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 ZNF804BA4D1E1 1349 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 A8MU76 341 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 SNAP91O60641 907 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 SLITRK3O94933 977 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 PARNO95453 639 aaKnown RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 IFNB1P01574 187 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 TTKP33981 857 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 GJC1P36383 396 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 EIF3EP60228 445 aaKnown RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 MRPS5P82675 430 aaKnown RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 OTUD4Q01804 1114 aaKnown RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 MTM1Q13496 603 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 UBE2SQ16763 222 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 GPR107Q5VW38 600 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 PDPK2PQ6A1A2 396 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 ACAD10Q6JQN1 1059 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 ZCCHC23Q6ZST2 131 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 PCGF5Q86SE9 256 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 TMEM102Q8N9M5 508 aaPredicted RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 BHLHE22Q8NFJ8 381 aaPredicted RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 EXD1Q8NHP7 514 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 TGFBRAP1Q8WUH2 860 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 PIGBQ92521 554 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 DLG3Q92796 817 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 MAELQ96JY0 434 aaKnown RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 CEP295NLQ96MC4 621 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 ALPK1Q96QP1 1244 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 C1orf50Q9BV19 199 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 HERC2P3Q9BVR0 1158 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 PCDH9Q9HC56 1237 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 TMOD3Q9NYL9 352 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 RABL2AQ9UBK7 228 aaPredicted RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 PRPF19Q9UMS4 504 aaKnown RBP8.87□□□□□ -0.99
LSM5-208ENST00000450169 TLL2Q9Y6L7 1015 aa8.87□□□□□ -0.99
LSM5-208ENST00000450169 C1orf232A0A0U1RR37 186 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 TTC34A8MYJ7 566 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 TRIM49D1C9J1S8 452 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 H3BRB1 525 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 SGK1O00141 431 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 KMOO15229 486 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 DYNC1LI2O43237 492 aaPredicted RBP8.86□□□□□ -0.99
LSM5-208ENST00000450169 GMNNO75496 209 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 MYO1DO94832 1006 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 LDHCP07864 332 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 ALOX5P09917 674 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 MYL4P12829 197 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 COX4I1P13073 169 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 CYP11B1P15538 503 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 KCNA2P16389 499 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 NR4A1P22736 598 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 NMT1P30419 496 aaKnown RBP8.86□□□□□ -0.99
LSM5-208ENST00000450169 GYG1P46976 350 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 THOP1P52888 689 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 MRPS9P82933 396 aaKnown RBP8.86□□□□□ -0.99
LSM5-208ENST00000450169 GALNT2Q10471 571 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 DPYSQ14117 519 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 BBS9Q3SYG4 887 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 MGAT5BQ3V5L5 792 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 WDR45BQ5MNZ6 344 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 AGAP7PQ5VUJ5 663 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 ANKRD22Q5VYY1 191 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 GALNT18Q6P9A2 607 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 TTC23LQ6PF05 361 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 ARCQ7LC44 396 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 PPIL6Q8IXY8 311 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 TAF1LQ8IZX4 1826 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 ELMOD1Q8N336 334 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 PLPP7Q8NBV4 271 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 ADAMTS16Q8TE57 1224 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 DOT1LQ8TEK3 1739 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 NSUN4Q96CB9 384 aaKnown RBP8.86□□□□□ -0.99
LSM5-208ENST00000450169 OCSTAMPQ9BR26 566 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 RTKNQ9BST9 563 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 CENPOQ9BU64 300 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 ANKRD60Q9BZ19 345 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 IMPG2Q9BZV3 1241 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 PARVGQ9HBI0 331 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 SEPT3Q9UH03 358 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 ATP11BQ9Y2G3 1177 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 DNAJC16Q9Y2G8 782 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 PCDHGA3Q9Y5H0 932 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 SNCAIPQ9Y6H5 919 aa8.86□□□□□ -0.99
LSM5-208ENST00000450169 TCRBV9S1A1TA0A576 114 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms