RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SAMSN1Q9NSI8 373 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 CALCOCO1Q9P1Z2 691 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 BCCIPQ9P287 314 aaKnown RBP eCLIP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 APEX2Q9UBZ4 518 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 XPO7Q9UIA9 1087 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 STOML2Q9UJZ1 356 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 CDV3Q9UKY7 258 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 NAALADL1Q9UQQ1 740 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 CNOT1A5YKK6 2376 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 CHD5Q8TDI0 1954 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 ATXN2Q99700 1313 aaKnown RBP11.34□□□□□ -0.59
SF3A1-203ENST00000444440 CACNA1EQ15878 2313 aa11.34□□□□□ -0.59
SF3A1-203ENST00000444440 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 PRR5-ARHGAP8B1AHC4 643 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 SLC30A4O14863 429 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 PRKCHP24723 683 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 HLA-FP30511 346 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 CLCN1P35523 988 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 PTGER3P43115 390 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 ARHGAP8P85298 464 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 ELF2Q15723 593 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 MAN2A1Q16706 1144 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 GBP6Q6ZN66 633 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 ARMCX6Q7L4S7 300 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 TAC4Q86UU9 113 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 PASD1Q8IV76 773 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 TMEFF1Q8IYR6 380 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 DEFB119Q8N690 84 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 NETO1Q8TDF5 533 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 DDI1Q8WTU0 396 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 TMEM74BQ9NUR3 256 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 THAP10Q9P2Z0 257 aaPredicted RBP11.33□□□□□ -0.6
SF3A1-203ENST00000444440 DACH1Q9UI36 760 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 PCDHGA5Q9Y5G8 931 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 STON1Q9Y6Q2 735 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 ASPMQ8IZT6 3477 aa11.33□□□□□ -0.6
SF3A1-203ENST00000444440 IGHV1OR15-9A0A0B4J2B8 117 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 FAM170AA1A519 330 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 GTPBP10A4D1E9 387 aaKnown RBP11.32□□□□□ -0.6
SF3A1-203ENST00000444440 FOXN3O00409 490 aaPredicted RBP11.32□□□□□ -0.6
SF3A1-203ENST00000444440 TM4SF5O14894 197 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 ALDH1A2O94788 518 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 RHOBTB1O94844 696 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 FBXO21O94952 628 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 CAVIN2O95810 425 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 IGLV3-25P01717 112 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 NCAM1P13591 858 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 USP8P40818 1118 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 DHPSP49366 369 aaPredicted RBP11.32□□□□□ -0.6
SF3A1-203ENST00000444440 HARS2P49590 506 aaKnown RBP11.32□□□□□ -0.6
SF3A1-203ENST00000444440 PDCLQ13371 301 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 ENPP2Q13822 863 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 ZNF234Q14588 700 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 FUT11Q495W5 492 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 PREPLQ4J6C6 727 aaPredicted RBP11.32□□□□□ -0.6
SF3A1-203ENST00000444440 AASDHQ4L235 1098 aaPredicted RBP11.32□□□□□ -0.6
SF3A1-203ENST00000444440 ADGRF1Q5T601 910 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 RNF43Q68DV7 783 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 TRMT11Q7Z4G4 463 aaKnown RBP11.32□□□□□ -0.6
SF3A1-203ENST00000444440 ANKS1BQ7Z6G8 1248 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 TMEM110Q86TL2 294 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 SLC47A2Q86VL8 602 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 PGBD3Q8N328 593 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 SLC39A13Q96H72 371 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 MRGPRX1Q96LB2 322 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 CPXM1Q96SM3 734 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 RTKNQ9BST9 563 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 ADAM33Q9BZ11 813 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 NUCKS1Q9H1E3 243 aaKnown RBP11.32□□□□□ -0.6
SF3A1-203ENST00000444440 NDST4Q9H3R1 872 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 PLCB1Q9NQ66 1216 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 DNAJC12Q9UKB3 198 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 FHOD1Q9Y613 1164 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 NCOR2Q9Y618 2525 aa11.32□□□□□ -0.6
SF3A1-203ENST00000444440 LNP1A1A4G5 178 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 PCNX2A6NKB5 2137 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 ACSL4O60488 711 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 LATS1O95835 1130 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 CYBBP04839 570 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 HLA-EP13747 358 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 PRKCSHP14314 528 aaPredicted RBP11.31□□□□□ -0.6
SF3A1-203ENST00000444440 ERCC5P28715 1186 aaPredicted RBP11.31□□□□□ -0.6
SF3A1-203ENST00000444440 CD70P32970 193 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 COPAP53621 1224 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 TBX4P57082 545 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 EIF4EBP2Q13542 120 aaPredicted RBP11.31□□□□□ -0.6
SF3A1-203ENST00000444440 MEA1Q16626 185 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 TPD52L1Q16890 204 aaPredicted RBP11.31□□□□□ -0.6
SF3A1-203ENST00000444440 VWA3BQ502W6 1294 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 MPPE1Q53F39 396 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 PIK3R6Q5UE93 754 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 RBM43Q6ZSC3 357 aaKnown RBP11.31□□□□□ -0.6
SF3A1-203ENST00000444440 ENOSF1Q7L5Y1 443 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 KIAA0907Q7Z7F0 614 aaPredicted RBP11.31□□□□□ -0.6
SF3A1-203ENST00000444440 ADIPOR2Q86V24 386 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 SLC41A1Q8IVJ1 513 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 ZNF366Q8N895 744 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 C1orf131Q8NDD1 294 aaKnown RBP11.31□□□□□ -0.6
SF3A1-203ENST00000444440 STK32AQ8WU08 396 aa11.31□□□□□ -0.6
SF3A1-203ENST00000444440 CYB5D2Q8WUJ1 264 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms