RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 HLTFQ14527 1009 aaKnown RBP eCLIP9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 SHHQ15465 462 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 BRMS1LQ5PSV4 323 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 FAM109BQ6ICB4 259 aaPredicted RBP9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 MSANTD2Q6P1R3 559 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 DRICH1Q6PGQ1 229 aaPredicted RBP9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 C1orf228Q6PIY5 440 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 CCNI2Q6ZMN8 369 aaPredicted RBP9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 MIB1Q86YT6 1006 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 GSPT2Q8IYD1 628 aaKnown RBP9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 POF1BQ8WVV4 589 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 SLCO2A1Q92959 643 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 ERP44Q9BS26 406 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 FRMD8P1Q9BZ68 369 aaPredicted RBP9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 UBE2OQ9C0C9 1292 aaKnown RBP9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 NACA2Q9H009 215 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 DPH5Q9H2P9 285 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 GDF3Q9NR23 364 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 TLR9Q9NR96 1032 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 HEY1Q9Y5J3 304 aa9.85□□□□□ -0.83
SMPD4P1-203ENST00000443839 DAPK3O43293 454 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 TBX18O95935 607 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 TGM2P21980 687 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 CARSP49589 748 aaKnown RBP9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 TPI1P60174 286 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 UBE3AQ05086 875 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 PLD1Q13393 1074 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 CUL1Q13616 776 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 PPP2R5DQ14738 602 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 SLC9A4Q6AI14 798 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 SYDE1Q6ZW31 735 aaPredicted RBP9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 TADA2BQ86TJ2 420 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 PQLC3Q8N755 202 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 PLD5Q8N7P1 536 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 MRPL43Q8N983 215 aaKnown RBP9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 SLC35B2Q8TB61 432 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 CASKIN2Q8WXE0 1202 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 NKD2Q969F2 451 aaPredicted RBP9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 CDK5RAP1Q96SZ6 601 aaKnown RBP9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 EPAS1Q99814 870 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 CCSER2Q9H7U1 834 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 TMEM51Q9NW97 253 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 MARCH2Q9P0N8 246 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 OR12D3Q9UGF7 316 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 ASIC3Q9UHC3 531 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 NFU1Q9UMS0 254 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 TLR6Q9Y2C9 796 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 IRAK3Q9Y616 596 aa9.84□□□□□ -0.83
SMPD4P1-203ENST00000443839 PDE4DIPQ5VU43 2346 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 HIDE1A8MVS5 230 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 C5orf67F2Z3F1 127 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 I6L893 689 aaPredicted RBP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 SGK1O00141 431 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 MOCS2O96007 188 aaPredicted RBP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 GLUD1P00367 558 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 ITGAVP06756 1048 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 ZDHHC11BP0C7U3 371 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 MYBL2P10244 700 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 SLC2A3P11169 496 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 HMGA1P17096 107 aaKnown RBP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 DNAJB1P25685 340 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 TNFRSF8P28908 595 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 TBX4P57082 545 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 EIF3EP60228 445 aaKnown RBP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 EIF4EBP2Q13542 120 aaPredicted RBP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 TRADDQ15628 312 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 DUPD1Q68J44 220 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 NPNTQ6UXI9 565 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 RFX8Q6ZV50 586 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 SPRED2Q7Z698 418 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 ITIH5Q86UX2 942 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 ZC3H18Q86VM9 953 aaKnown RBP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 DDX42Q86XP3 938 aaKnown RBP eCLIP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 SPPL3Q8TCT6 385 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 HNRNPLLQ8WVV9 542 aaKnown RBP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 OVCA2Q8WZ82 227 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 MYRFLQ96LU7 910 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 KLHL5Q96PQ7 755 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 TMEM121Q9BTD3 319 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 SIK2Q9H0K1 926 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 ARHGEF4Q9NR80 690 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 FAM114A2Q9NRY5 505 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 ARHGEF38Q9NXL2 777 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 TRPM5Q9NZQ8 1165 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 ZNF840PA6NDX5 716 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 C2orf71A6NGG8 1288 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 FAM72CH0Y354 149 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 PAGE1O75459 146 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 ARHGEF15O94989 841 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 APOEP02649 317 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 LRG1P02750 347 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 RB1P06400 928 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 RBP3P10745 1247 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 AMPD1P23109 780 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 GGCXP38435 758 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 VPS41P49754 854 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 ZNF135P52742 658 aaPredicted RBP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 NOMO1Q15155 1222 aa9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 TRIP13Q15645 432 aaPredicted RBP9.83□□□□□ -0.84
SMPD4P1-203ENST00000443839 OASLQ15646 514 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms