RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 NAALADL1Q9UQQ1 740 aa20.91■□□□□ 0.94
LRCH3-208ENST00000443727 RAD54BQ9Y620 910 aa20.91■□□□□ 0.94
LRCH3-208ENST00000443727 MYO18AQ92614 2054 aaKnown RBP20.9■□□□□ 0.94
LRCH3-208ENST00000443727 KCNJ18B7U540 433 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 E5RJQ4 531 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 NPC1O15118 1278 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 RPL34P49207 117 aaKnown RBP20.9■□□□□ 0.94
LRCH3-208ENST00000443727 RING1Q06587 406 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 KCNJ12Q14500 433 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 CT47A1Q5JQC4 288 aaPredicted RBP20.9■□□□□ 0.94
LRCH3-208ENST00000443727 PLA2G2CQ5R387 149 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 DQX1Q8TE96 717 aaKnown RBP20.9■□□□□ 0.94
LRCH3-208ENST00000443727 DDX50Q9BQ39 737 aaKnown RBP20.9■□□□□ 0.94
LRCH3-208ENST00000443727 ELOVL2Q9NXB9 296 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 CALCOCO1Q9P1Z2 691 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 CLEC4EQ9ULY5 219 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 STON1Q9Y6Q2 735 aa20.9■□□□□ 0.94
LRCH3-208ENST00000443727 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 DCDC2BA2VCK2 349 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 WASH3PC4AMC7 463 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 TIMM44O43615 452 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 SYNCRIPO60506 623 aaKnown RBP20.89■□□□□ 0.93
LRCH3-208ENST00000443727 IGLV3-27P01718 113 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 HOXD9P28356 352 aaPredicted RBP20.89■□□□□ 0.93
LRCH3-208ENST00000443727 KRT9P35527 623 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 PDCLQ13371 301 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 EIF4HQ15056 248 aaKnown RBP20.89■□□□□ 0.93
LRCH3-208ENST00000443727 MAP7D1Q3KQU3 841 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 KIAA1211LQ6NV74 962 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 RFWD3Q6PCD5 774 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 ARMCX6Q7L4S7 300 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 TMEM110Q86TL2 294 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 PASD1Q8IV76 773 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 TMEFF1Q8IYR6 380 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 FRMD1Q8N878 549 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 ADAM32Q8TC27 787 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 NOX5Q96PH1 765 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 SIX2Q9NPC8 291 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 SAMSN1Q9NSI8 373 aaKnown RBP20.89■□□□□ 0.93
LRCH3-208ENST00000443727 THAP10Q9P2Z0 257 aaPredicted RBP20.89■□□□□ 0.93
LRCH3-208ENST00000443727 CYTH4Q9UIA0 394 aa20.89■□□□□ 0.93
LRCH3-208ENST00000443727 DCHS1Q96JQ0 3298 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 GOLGA6L7A0A1B0GV03 622 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 SLC30A4O14863 429 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 PAPSS1O43252 624 aaPredicted RBP20.88■□□□□ 0.93
LRCH3-208ENST00000443727 ACSL4O60488 711 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 FYNP06241 537 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 NDUFV2P19404 249 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 YWHAZP63104 245 aaKnown RBP20.88■□□□□ 0.93
LRCH3-208ENST00000443727 RAPGEF1Q13905 1077 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 MIIPQ5JXC2 388 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 IL31Q6EBC2 164 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 TCEAL6Q6IPX3 200 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 KIAA1324Q6UXG2 1013 aaKnown RBP20.88■□□□□ 0.93
LRCH3-208ENST00000443727 PIGKQ92643 395 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 TCEAL3Q969E4 200 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 POPDC2Q9HBU9 364 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 MBD1Q9UIS9 605 aaPredicted RBP20.88■□□□□ 0.93
LRCH3-208ENST00000443727 TLR6Q9Y2C9 796 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 NFE2L3Q9Y4A8 694 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 CACNA1AO00555 2505 aa20.88■□□□□ 0.93
LRCH3-208ENST00000443727 TYW5A2RUC4 315 aaKnown RBP20.87■□□□□ 0.93
LRCH3-208ENST00000443727 FOXN3O00409 490 aaPredicted RBP20.87■□□□□ 0.93
LRCH3-208ENST00000443727 IRAK2O43187 625 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 TBL1XO60907 577 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 ZNF217O75362 1048 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 EEF1GP26641 437 aaKnown RBP20.87■□□□□ 0.93
LRCH3-208ENST00000443727 SNX16P57768 344 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 RPL6Q02878 288 aaKnown RBP20.87■□□□□ 0.93
LRCH3-208ENST00000443727 NNTQ13423 1086 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 TCP11X2Q5H9J9 407 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 SYPL2Q5VXT5 272 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 SMYD5Q6GMV2 418 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 SLC36A4Q6YBV0 504 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 BEND5Q7L4P6 421 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 TAC4Q86UU9 113 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 WFIKKN2Q8TEU8 576 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 SORCS1Q8WY21 1168 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 AZIN2Q96A70 460 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 PPP1R13BQ96KQ4 1090 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 PDCL3Q9H2J4 239 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 SYNCQ9H7C4 482 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 ABCB8Q9NUT2 735 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 AJAP1Q9UKB5 411 aaPredicted RBP20.87■□□□□ 0.93
LRCH3-208ENST00000443727 CYP8B1Q9UNU6 501 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 CEP83Q9Y592 693 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 ABCA7Q8IZY2 2146 aa20.87■□□□□ 0.93
LRCH3-208ENST00000443727 KHNYNO15037 678 aaKnown RBP20.86■□□□□ 0.93
LRCH3-208ENST00000443727 AP5Z1O43299 807 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 MOCS2O96007 188 aaPredicted RBP20.86■□□□□ 0.93
LRCH3-208ENST00000443727 APOEP02649 317 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 TPM2P07951 284 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 PNMA6AP0CW24 399 aaPredicted RBP20.86■□□□□ 0.93
LRCH3-208ENST00000443727 IL12RB1P42701 662 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 BPIFB4P59827 614 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 ZNF234Q14588 700 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 FAM133BQ5BKY9 247 aaKnown RBP20.86■□□□□ 0.93
LRCH3-208ENST00000443727 SPDYCQ5MJ68 293 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 PIK3R6Q5UE93 754 aa20.86■□□□□ 0.93
LRCH3-208ENST00000443727 SERPINA13PQ6UXR4 307 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms