RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 CCDC38Q502W7 563 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DNAJC21Q5F1R6 531 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MDH1BQ5I0G3 518 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SPDYAQ5MJ70 313 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 VARS2Q5ST30 1063 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MPP7Q5T2T1 576 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ZFYVE27Q5T4F4 411 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CYP4A22Q5TCH4 519 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MANEALQ5VSG8 457 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 KIAA0319Q5VV43 1072 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 BSPRYQ5W0U4 402 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 BTBD8Q5XKL5 378 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 AFMIDQ63HM1 303 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 HEATR6Q6AI08 1181 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SCARA3Q6AZY7 606 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ALG1LQ6GMV1 187 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ITPRIPL1Q6GPH6 555 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TRNP1Q6NT89 227 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 FUT10Q6P4F1 479 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PSRC1Q6PGN9 363 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ELMSAN1Q6PJG2 1045 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RGS9BPQ6ZS82 235 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RFX8Q6ZV50 586 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 NLRP9Q7RTR0 991 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GSTA5Q7RTV2 222 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 YTHDF3Q7Z739 585 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 UBE2Q1Q7Z7E8 422 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GALNT7Q86SF2 657 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DDX53Q86TM3 631 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SETD3Q86TU7 594 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ITIH5Q86UX2 942 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TAX1BP1Q86VP1 789 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RAVER1Q8IY67 606 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TCEAL8Q8IYN2 117 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 VPS52Q8N1B4 723 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 UMODL1-AS1Q8N2C9 162 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PQLC3Q8N755 202 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 EMC1Q8N766 993 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DNAJC5GQ8N7S2 189 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ATP6V0D2Q8N8Y2 350 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ATP11CQ8NB49 1132 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 STKLD1Q8NE28 680 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 FBXO22Q8NEZ5 403 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PCDH19Q8TAB3 1148 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 UBA3Q8TBC4 463 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SP7Q8TDD2 431 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ACMSDQ8TDX5 336 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SH3TC2Q8TF17 1288 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RNF139Q8WU17 664 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TFB1MQ8WVM0 346 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 C1orf54Q8WWF1 131 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 HTR3CQ8WXA8 447 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PRCCQ92733 491 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CLP1Q92989 425 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 USP13Q92995 863 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MYLPFQ96A32 169 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TTC17Q96AE7 1141 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RNF25Q96BH1 459 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 FAM149B1Q96BN6 582 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PLD4Q96BZ4 506 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GRAMD1AQ96CP6 724 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MTBPQ96DY7 904 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TMEM169Q96HH4 297 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 IGSF21Q96ID5 467 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ZNF668Q96K58 619 aaPredicted RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 BTBD6Q96KE9 485 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 BTN2A3PQ96KV6 586 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SPATA13Q96N96 652 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DEFB118Q96PH6 123 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 QKIQ96PU8 341 aaKnown RBP eCLIP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PEBP4Q96S96 227 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 SRPK1Q96SB4 655 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RBM15Q96T37 977 aaKnown RBP eCLIP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CYTH2Q99418 400 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MED10Q9BTT4 135 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TTPALQ9BTX7 342 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DHRS4Q9BTZ2 278 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 APOL6Q9BWW8 343 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CALN1Q9BXU9 219 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ULBP1Q9BZM6 244 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TRIM7Q9C029 511 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 FAM107BQ9H098 131 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MTIF3Q9H2K0 278 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 DPEP3Q9H4B8 488 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 C11orf49Q9H6J7 331 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ACSS3Q9H6R3 686 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 CWH43Q9H720 699 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 GOLGA2P5Q9HBQ8 144 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 RXFP1Q9HBX9 757 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ARNT2Q9HBZ2 717 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MRM3Q9HC36 420 aaKnown RBP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 TRPC7Q9HCX4 862 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 IL23AQ9NPF7 189 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 PRDM10Q9NQV6 1147 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 ARHGEF4Q9NR80 690 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 KRT82Q9NSB4 513 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 FAM49BQ9NUQ9 324 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MARCH5Q9NX47 278 aa2.92□□□□□ -1.94
LINC00393-201ENST00000443621 MKS1Q9NXB0 559 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms