RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 TMEM270Q6UE05 265 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 LIMS2Q7Z4I7 341 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 IRF2BP2Q7Z5L9 587 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 METTL23Q86XA0 190 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 TMEM139Q8IV31 216 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 ARHGEF19Q8IW93 802 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 COLGALT2Q8IYK4 626 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 UBR7Q8N806 425 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 HERVK_113Q902F9 699 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 LPPQ93052 612 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 C18orf25Q96B23 403 aaPredicted RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 CASD1Q96PB1 797 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 NOX5Q96PH1 765 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 MMS19Q96T76 1030 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 EIF3CQ99613 913 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 PI4K2AQ9BTU6 479 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 GPR88Q9GZN0 384 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 NHEJ1Q9H9Q4 299 aaPredicted RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 CARS2Q9HA77 564 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 APOBEC3GQ9HC16 384 aaKnown RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 ARHGEF4Q9NR80 690 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 LCMT1Q9UIC8 334 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 PCDHB4Q9Y5E5 795 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 SNX9Q9Y5X1 595 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 EPN1Q9Y6I3 576 aaPredicted RBP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 VWA8A3KMH1 1905 aa7.54□□□□□ -1.2
R3HDM1-210ENST00000443537 FOXN3O00409 490 aaPredicted RBP7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 KRT86O43790 486 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 POMCP01189 267 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ESR1P03372 595 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ALDH2P05091 517 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 MYBL1P10243 752 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 VDRP11473 427 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 CYP11B1P15538 503 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ACO1P21399 889 aaKnown RBP7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 WARSP23381 471 aaKnown RBP7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 USP8P40818 1118 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ECI1P42126 302 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 GRIA2P42262 883 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 SEPHS1P49903 392 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 CLCNKBP51801 687 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 KIF11P52732 1056 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 SLC8A3P57103 927 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 CREMQ03060 361 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ZP2Q05996 745 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 LRMPQ12912 555 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 SDE2Q6IQ49 451 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ZNF574Q6ZN55 896 aaPredicted RBP7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ADGRF2Q8IZF7 708 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 THEM5Q8N1Q8 247 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ZNF689Q96CS4 500 aaPredicted RBP7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 TMEM176AQ96HP8 235 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 VCPIP1Q96JH7 1222 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 IER2Q9BTL4 223 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 SLC12A9Q9BXP2 914 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 LHX5Q9H2C1 402 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 NKX2-4Q9H2Z4 354 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 SNX25Q9H3E2 840 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 HAUS4Q9H6D7 363 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 RC3H2Q9HBD1 1191 aaKnown RBP7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ARHGAP20Q9P2F6 1191 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 MYO1AQ9UBC5 1043 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 ADAM28Q9UKQ2 775 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 SSX2IPQ9Y2D8 614 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 INSL6Q9Y581 213 aa7.53□□□□□ -1.2
R3HDM1-210ENST00000443537 PATJQ8NI35 1801 aa7.52□□□□□ -1.2
R3HDM1-210ENST00000443537 CASTOR2A6NHX0 329 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 TBKBP1A7MCY6 615 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 BTNL10A8MVZ5 291 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 H7C4K7 107 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 CYB561D2O14569 222 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 GABRDO14764 452 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 ZNF205O95201 554 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 GJB5O95377 273 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 SETSIPP0DME0 302 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 CD8BP10966 210 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 FGFR1P11362 822 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 IFNGR1P15260 489 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 ENDOUP21128 410 aaKnown RBP7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 TNFAIP3P21580 790 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 HOXC12P31275 282 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 CDH5P33151 784 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 GNL1P36915 607 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 HTRA4P83105 476 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 TSPY1Q01534 308 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 SOWAHAQ2M3V2 549 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 ASTE1Q2TB18 679 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 YOD1Q5VVQ6 348 aaPredicted RBP7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 SPOPLQ6IQ16 392 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 GJB7Q6PEY0 223 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 DSTYKQ6XUX3 929 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 SPRED2Q7Z698 418 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 DTX1Q86Y01 620 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 CRYBG2Q8N1P7 616 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 NAT16Q8N8M0 369 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 KIAA1524Q8TCG1 905 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 DPF3Q92784 378 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 BADQ92934 168 aa7.52□□□□□ -1.21
R3HDM1-210ENST00000443537 SENP8Q96LD8 212 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms