RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ZNF341Q9BYN7 854 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 COPS7BQ9H9Q2 264 aaPredicted RBP17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 BTBD19C9JJ37 291 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 H0YIN7 160 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 AIM2O14862 343 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 TRPA1O75762 1119 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 LDHAP00338 332 aaKnown RBP17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 CDH8P55286 799 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 PDK1Q15118 436 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 SLC9B1Q4ZJI4 515 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 PPM1LQ5SGD2 360 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 SLFN12LQ6IEE8 588 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 PQLC3Q8N755 202 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 ZNF526Q8TF50 670 aaPredicted RBP17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 PIWIL1Q96J94 861 aaKnown RBP17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 LENG8Q96PV6 779 aaPredicted RBP17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 DHX33Q9H6R0 707 aaKnown RBP17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 C6orf203Q9P0P8 240 aaPredicted RBP17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 GNEQ9Y223 722 aaKnown RBP17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 NR2E3Q9Y5X4 410 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 PSAT1Q9Y617 370 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 H0YCG3 227 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 GRAP2O75791 330 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 RGS20O76081 388 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 ENDOD1O94919 500 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 TNFAIP8O95379 198 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 KCNA2P16389 499 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 IL4RP24394 825 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 MAGEA3P43357 314 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 HDAC4P56524 1084 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 GHRHRQ02643 423 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 CYLC2Q14093 348 aaPredicted RBP17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 KRT81Q14533 505 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 TIFABQ6ZNK6 161 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 ZNF410Q86VK4 478 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 RNF148Q8N7C7 305 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 PRPF31Q8WWY3 499 aaKnown RBP17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 PGBD4Q96DM1 585 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 ZFRQ96KR1 1074 aaKnown RBP17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 RNF157Q96PX1 679 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 KCNK16Q96T55 309 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 TMEM39BQ9GZU3 492 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 LIN28AQ9H9Z2 209 aaKnown RBP17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 PIGRP01833 764 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 XRCC1P18887 633 aaPredicted RBP17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 HSPA1LP34931 641 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 SERPINB5P36952 375 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 NUDT2P50583 147 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 THOP1P52888 689 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 TFAMQ00059 246 aaKnown RBP17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 TMEM62Q0P6H9 643 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 SLC10A2Q12908 348 aaPredicted RBP17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 KLF10Q13118 480 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 APOFQ13790 326 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 FAM102AQ5T9C2 384 aaPredicted RBP17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 AHI1Q8N157 1196 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 MAPK15Q8TD08 544 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 LRGUKQ96M69 825 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 Q9H521 79 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 ZNF696Q9H7X3 374 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 COG4Q9H9E3 785 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 TMEM216Q9P0N5 145 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 HMGXB4Q9UGU5 601 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 RIMS3Q9UJD0 308 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 RAB26Q9ULW5 256 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
NPC1L1-203ENST00000423141 PSAPP07602 524 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 FAM163BP0C2L3 166 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 TCF7P36402 384 aaPredicted RBP17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 SERPINB9P50453 376 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 FKBP1AP62942 108 aaKnown RBP17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 ADGRE1Q14246 886 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 ZNF699Q32M78 642 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 TSHZ1Q6ZSZ6 1077 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 MAP7D3Q8IWC1 876 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 BRSK2Q8IWQ3 736 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 RDM1Q8NG50 284 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 RTP4Q96DX8 246 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 HSPBAP1Q96EW2 488 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 PPP1R36Q96LQ0 422 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 XPNPEP3Q9NQH7 507 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 PCDHA11Q9Y5I1 949 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 WDR27A2RRH5 827 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 FAM189A1O60320 539 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 TRMUO75648 421 aaKnown RBP17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 F7P08709 466 aaPredicted RBP17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 ALOX15P16050 662 aaPredicted RBP17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 ACTR2P61160 394 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 ABCE1P61221 599 aaKnown RBP17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 CBLBQ13191 982 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 TRPC3Q13507 836 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 DCTN2Q13561 401 aaKnown RBP17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 TFDP2Q14188 446 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 ACAP1Q15027 740 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 SH3D19Q5HYK7 790 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 RARS2Q5T160 578 aaKnown RBP17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 WDR49Q8IV35 697 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 TNS4Q8IZW8 715 aa17.15■□□□□ 0.34
NPC1L1-203ENST00000423141 ZNF781Q8N8C0 355 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms