RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 ATRIPQ8WXE1 791 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 RSAD2Q8WXG1 361 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 OTUB2Q96DC9 234 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 BTN2A3PQ96KV6 586 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 RAB6CQ9H0N0 254 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 WDCPQ9H6R7 721 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 SLC12A6Q9UHW9 1150 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 SALL4Q9UJQ4 1053 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 STOML2Q9UJZ1 356 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 AGO1Q9UL18 857 aaKnown RBP17.26■□□□□ 0.35
SUMO1-208ENST00000409627 PPP2R2CQ9Y2T4 447 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 DUSP10Q9Y6W6 482 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 COL4A2P08572 1712 aa17.26■□□□□ 0.35
SUMO1-208ENST00000409627 CHADO15335 359 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 KRT86O43790 486 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 LRCH4O75427 683 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 SLC11A2P49281 568 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 GRM2Q14416 872 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 PDGFRLQ15198 375 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 DENND1CQ8IV53 801 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 BBS7Q8IWZ6 715 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 FAM217AQ8IXS0 508 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 SLC44A3Q8N4M1 653 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 NTAN1Q96AB6 310 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 TRMT61BQ9BVS5 477 aaKnown RBP17.25■□□□□ 0.35
SUMO1-208ENST00000409627 TKTL2Q9H0I9 626 aa17.25■□□□□ 0.35
SUMO1-208ENST00000409627 DUS2Q9NX74 493 aaKnown RBP17.25■□□□□ 0.35
SUMO1-208ENST00000409627 MYO10Q9HD67 2058 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 TICRRQ7Z2Z1 1910 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 BUB1O43683 1085 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 ACSL4O60488 711 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 MOCS2O96007 188 aaPredicted RBP17.24■□□□□ 0.35
SUMO1-208ENST00000409627 ASGR2P07307 311 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 IFNAR2P48551 515 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 AIF1P55008 147 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 MESDQ14696 234 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 IFI16Q16666 785 aaKnown RBP17.24■□□□□ 0.35
SUMO1-208ENST00000409627 ARL13BQ3SXY8 428 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 C11orf63Q6NUN7 778 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 CPXM2Q8N436 756 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 RNF10Q8N5U6 811 aaKnown RBP17.24■□□□□ 0.35
SUMO1-208ENST00000409627 TPCN2Q8NHX9 752 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 ASIC4Q96FT7 647 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 FAM83CQ9BQN1 747 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 TRIM10Q9UDY6 481 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 WNT6Q9Y6F9 365 aa17.24■□□□□ 0.35
SUMO1-208ENST00000409627 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.24■□□□□ 0.356e-10■□□□□ 10.6
SUMO1-208ENST00000409627 COL4A3Q01955 1670 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 I6L893 689 aaPredicted RBP17.23■□□□□ 0.35
SUMO1-208ENST00000409627 SCAMP3O14828 347 aaKnown RBP17.23■□□□□ 0.35
SUMO1-208ENST00000409627 ZSCAN12O43309 604 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 BUB1BO60566 1050 aaPredicted RBP17.23■□□□□ 0.35
SUMO1-208ENST00000409627 PAGE1O75459 146 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 MIPP30301 263 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 GDI1P31150 447 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 ADRA1BP35368 520 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 CHKAP35790 457 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 SLC1A1P43005 524 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 SCAPQ12770 1279 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 TDGQ13569 410 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 EML3Q32P44 896 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 ADGRF1Q5T601 910 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 ACBD5Q5T8D3 534 aaPredicted RBP17.23■□□□□ 0.35
SUMO1-208ENST00000409627 NADSYN1Q6IA69 706 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 SCYL2Q6P3W7 929 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 CCDC185Q8N715 623 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 ATP2A3Q93084 1043 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 HAPLN3Q96S86 360 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 DDX50Q9BQ39 737 aaKnown RBP17.23■□□□□ 0.35
SUMO1-208ENST00000409627 IRX2Q9BZI1 471 aaPredicted RBP17.23■□□□□ 0.35
SUMO1-208ENST00000409627 ANLNQ9NQW6 1124 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 XPO7Q9UIA9 1087 aaKnown RBP17.23■□□□□ 0.35
SUMO1-208ENST00000409627 USP18Q9UMW8 372 aa17.23■□□□□ 0.35
SUMO1-208ENST00000409627 MACROD2A1Z1Q3 448 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 TMEM110-MUSTN1A8MSY1 372 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 ARNTLO00327 626 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 PRPSAP2O60256 369 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 NFATC1O95644 943 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 NAP1L1P55209 391 aaKnown RBP17.22■□□□□ 0.35
SUMO1-208ENST00000409627 SLC25A11Q02978 314 aaKnown RBP17.22■□□□□ 0.35
SUMO1-208ENST00000409627 FAM133BQ5BKY9 247 aaKnown RBP17.22■□□□□ 0.35
SUMO1-208ENST00000409627 MS4A13Q5J8X5 152 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 PIK3R6Q5UE93 754 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 DAB2IPQ5VWQ8 1189 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 SLFN11Q7Z7L1 901 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 PSTKQ8IV42 348 aaKnown RBP17.22■□□□□ 0.35
SUMO1-208ENST00000409627 GJD3Q8N144 294 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 IRF7Q92985 503 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 ZFYVE19Q96K21 471 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 C1orf74Q96LT6 269 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 PEBP4Q96S96 227 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 PRMT1Q99873 361 aaKnown RBP17.22■□□□□ 0.35
SUMO1-208ENST00000409627 LINC00597Q9H2U6 94 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 BRD9Q9H8M2 597 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 TRPV5Q9NQA5 729 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 FZD10Q9ULW2 581 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 PYCARDQ9ULZ3 195 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 HS3ST4Q9Y661 456 aa17.22■□□□□ 0.35
SUMO1-208ENST00000409627 GFRA2O00451 464 aa17.21■□□□□ 0.35
SUMO1-208ENST00000409627 SRFP11831 508 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms