RNA–Protein interactions for RNA: ENST00000407585.5

PACSIN2-205, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 1 (best) BASIC

Gene PACSIN2, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-205ENST00000407585 NMD3Q96D46 503 aaKnown RBP17.76■□□□□ 0.43
PACSIN2-205ENST00000407585 GCNAQ96QF7 691 aa17.76■□□□□ 0.43
PACSIN2-205ENST00000407585 RNPEPQ9H4A4 650 aa17.76■□□□□ 0.43
PACSIN2-205ENST00000407585 XPNPEP3Q9NQH7 507 aa17.76■□□□□ 0.43
PACSIN2-205ENST00000407585 CCDC160A6NGH7 325 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 LACTBL1A8MY62 500 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 E9PBE3 544 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 KLHL41O60662 606 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 FARP2O94887 1054 aaPredicted RBP17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 VDRP11473 427 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 KCNT2Q6UVM3 1135 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 CES3Q6UWW8 571 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 ARHGAP22Q7Z5H3 698 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 SATL1Q86VE3 508 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 MTMR14Q8NCE2 650 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 MCUQ8NE86 351 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 B4GALNT2Q8NHY0 566 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 CDKL2Q92772 493 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 CMTM5Q96DZ9 223 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 PPP1R36Q96LQ0 422 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 CEP41Q9BYV8 373 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 EMCNQ9ULC0 261 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 POMPQ9Y244 141 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 PLIN3O60664 434 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 GLRA3O75311 464 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 ALDOAP04075 364 aaKnown RBP17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 SERPINE1P05121 402 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 ATP5BP06576 529 aaKnown RBP17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 TYK2P29597 1187 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 CDK18Q07002 472 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 MSLNQ13421 630 aaPredicted RBP17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 MXD4Q14582 209 aaPredicted RBP17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 LY6KQ17RY6 165 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 HEATR6Q6AI08 1181 aaKnown RBP17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 PHTF2Q8N3S3 785 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 NME8Q8N427 588 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 ICA1LQ8NDH6 482 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 CDT1Q9H211 546 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 NRDE2Q9H7Z3 1164 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 ZNF358Q9NW07 568 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 CLIC5Q9NZA1 410 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 USP4Q13107 963 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 PDK3Q15120 406 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 PDCD2Q16342 344 aaPredicted RBP17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 FRMD7Q6ZUT3 714 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 MAVSQ7Z434 540 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 RTP4Q96DX8 246 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 HPDLQ96IR7 371 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 FAM49BQ9NUQ9 324 aa17.75■□□□□ 0.43
PACSIN2-205ENST00000407585 CCNT2O60583 730 aaKnown RBP17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 DESP17661 470 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 ATXN1P54253 815 aaKnown RBP17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 GOLGA7BQ2TAP0 167 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 AS3MTQ9HBK9 375 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 SEPT10Q9P0V9 454 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 PSAT1Q9Y617 370 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 CAPN8A6NHC0 703 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 OR6B1O95007 311 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 GSRP00390 522 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 F7P08709 466 aaPredicted RBP17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 RALBP11234 206 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 CYP3A5P20815 502 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 SLC10A2Q12908 348 aaPredicted RBP17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 PCLAFQ15004 111 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 PACS1Q6VY07 963 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 TNS4Q8IZW8 715 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 SEPT1Q8WYJ6 367 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 EZH1Q92800 747 aaPredicted RBP17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 ITGA11Q9UKX5 1188 aa17.74■□□□□ 0.43
PACSIN2-205ENST00000407585 ACKR2O00590 384 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 P4HA1P13674 534 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 TFE3P19532 575 aaPredicted RBP17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 ITGAXP20702 1163 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 MGAT1P26572 445 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 GRIA2P42262 883 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 CLCN3P51790 818 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 OAZ1P54368 228 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 LRRC23Q53EV4 343 aaPredicted RBP17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 ILDR2Q71H61 639 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 SAMD7Q7Z3H4 446 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 PGBD4Q96DM1 585 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 B3GNT5Q9BYG0 378 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 UBE2OQ9C0C9 1292 aaKnown RBP17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 TMEM216Q9P0N5 145 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 NOP56O00567 594 aaKnown RBP17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 STAG3L1P0CL83 205 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 RANBP1P43487 201 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 HNRNPDQ14103 355 aaKnown RBP17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 SLC9A4Q6AI14 798 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 ATG14Q6ZNE5 492 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 TSHZ1Q6ZSZ6 1077 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 ADGRG6Q86SQ4 1221 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 ACTRT2Q8TDY3 377 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 NAT14Q8WUY8 206 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 JADE3Q92613 823 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 KCNN1Q92952 543 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 AZIN2Q96A70 460 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 SIKE1Q9BRV8 207 aa17.73■□□□□ 0.43
PACSIN2-205ENST00000407585 C2orf40Q9H1Z8 148 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms