RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 ANKMY2Q8IV38 441 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 TAB3Q8N5C8 712 aaPredicted RBP12.68□□□□□ -0.38
CLIP4-203ENST00000401617 FBXO36Q8NEA4 188 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 SCAMP5Q8TAC9 235 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 CCDC110Q8TBZ0 833 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 SH3TC2Q8TF17 1288 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 TFB1MQ8WVM0 346 aaKnown RBP12.68□□□□□ -0.38
CLIP4-203ENST00000401617 CASD1Q96PB1 797 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 XPO6Q96QU8 1125 aaKnown RBP12.68□□□□□ -0.38
CLIP4-203ENST00000401617 KLC2Q9H0B6 622 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 CCDC134Q9H6E4 229 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLIP4-203ENST00000401617 COX16Q9P0S2 106 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 SLC24A2Q9UI40 661 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 RAD54BQ9Y620 910 aa12.68□□□□□ -0.38
CLIP4-203ENST00000401617 GMNCA6NCL1 334 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 TPSB2P20231 275 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 MAGEA3P43357 314 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 TPSAB1Q15661 275 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 ARL13BQ3SXY8 428 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 VSTM1Q6UX27 236 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 TAC4Q86UU9 113 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 CAND1Q86VP6 1230 aaKnown RBP12.67□□□□□ -0.38
CLIP4-203ENST00000401617 NLRP14Q86W24 1093 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 IGDCC3Q8IVU1 814 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 DCP1BQ8IZD4 617 aaKnown RBP12.67□□□□□ -0.38
CLIP4-203ENST00000401617 HTR3CQ8WXA8 447 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 EDEM1Q92611 657 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 FUBP3Q96I24 572 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLIP4-203ENST00000401617 CCT8L2Q96SF2 557 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 DHRS4Q9BTZ2 278 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 ACSS3Q9H6R3 686 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 VPS37BQ9H9H4 285 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 GREB1Q4ZG55 1949 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 CREB3O43889 395 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 ZNF189O75820 626 aaPredicted RBP12.67□□□□□ -0.38
CLIP4-203ENST00000401617 METTL18O95568 372 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 FAM107AO95990 144 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 CREB1P16220 341 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 SSTR1P30872 391 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 PHBP35232 272 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 SLC5A3P53794 718 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 SEC24CP53992 1094 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 NR1H3Q13133 447 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 SEMA5AQ13591 1074 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 PDK1Q15118 436 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 TCTN1Q2MV58 587 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 BBS9Q3SYG4 887 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 HEATR6Q6AI08 1181 aaKnown RBP12.67□□□□□ -0.38
CLIP4-203ENST00000401617 C3orf62Q6ZUJ4 267 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 AGGF1Q8N302 714 aaeCLIP12.67□□□□□ -0.38
CLIP4-203ENST00000401617 DQX1Q8TE96 717 aaKnown RBP12.67□□□□□ -0.38
CLIP4-203ENST00000401617 LRRN4Q8WUT4 740 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 SEPT8Q92599 483 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 APBB2Q92870 758 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 FAM193BQ96PV7 902 aaPredicted RBP12.67□□□□□ -0.38
CLIP4-203ENST00000401617 SELENOSQ9BQE4 189 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 PCDHB7Q9Y5E2 793 aa12.67□□□□□ -0.38
CLIP4-203ENST00000401617 A0A0A0MRY4 1105 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 TADA2AO75478 443 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 ERCC2P18074 760 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 ELK3P41970 407 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 NFE2Q16621 373 aaPredicted RBP12.66□□□□□ -0.38
CLIP4-203ENST00000401617 SLC39A12Q504Y0 691 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 VARS2Q5ST30 1063 aaKnown RBP12.66□□□□□ -0.38
CLIP4-203ENST00000401617 SCD5Q86SK9 330 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 TRABD2AQ86V40 505 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 VPS52Q8N1B4 723 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 C8orf48Q96LL4 319 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 SPATA13Q96N96 652 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 LGMNQ99538 433 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 OSBPL2Q9H1P3 480 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 WDCPQ9H6R7 721 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 PPANQ9NQ55 473 aaKnown RBP12.66□□□□□ -0.38
CLIP4-203ENST00000401617 ABCC13Q9NSE7 274 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 ADAM28Q9UKQ2 775 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 PRG3Q9Y2Y8 225 aaPredicted RBP12.66□□□□□ -0.38
CLIP4-203ENST00000401617 MICAL3Q7RTP6 2002 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 NDUFAB1O14561 156 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 SPAG6O75602 509 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 CXCL10P02778 98 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 OR4Q2P0C623 313 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 FGFR3P22607 806 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 CYP2C18P33260 490 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 FDFT1P37268 417 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 GRIK1P39086 918 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 MAGEA11P43364 429 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 YWHAGP61981 247 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLIP4-203ENST00000401617 ANKRD20A2Q5SQ80 823 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 FAM182AQ5T1J6 154 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 ANKRD20A1Q5TYW2 823 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 ANKRD20A3Q5VUR7 823 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 ZNF534Q76KX8 674 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 LRRC39Q96DD0 335 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 ZNF317Q96PQ6 595 aaPredicted RBP12.66□□□□□ -0.38
CLIP4-203ENST00000401617 TKTL2Q9H0I9 626 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 PRDM12Q9H4Q4 367 aa12.66□□□□□ -0.38
CLIP4-203ENST00000401617 INTS9Q9NV88 658 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms